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sw_10_scaffold_427

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_427_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..435)
DNA (435bp) protein (145aa)
CRISPR-associated protein Csc2 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LHU0_HALWC
csc2; CRISPR-associated protein Csc2
CRISPR-associated protein Cas7 {ECO:0000313|EMBL:CCC39328.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi
sw_10_scaffold_427_2
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(438..905)
DNA (468bp) protein (156aa)
CRISPR associated protein Csc3 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YXT3_9EURY
CRISPR associated protein Csc3 {ECO:0000313|EMBL:GAD53622.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
hypothetical protein
sw_10_scaffold_427_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(902..3367)
DNA (2466bp) protein (822aa)
Uncharacterized protein n=2 Tax=Halarchaeum acidiphilum RepID=U3AFR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD53623.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
CRISPR-associated protein Csc3
sw_10_scaffold_427_4
unknown

Not on your lists

comp(3371..3958)
DNA (588bp) protein (196aa)

This feature has no annotations

sw_10_scaffold_427_5
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3955..4641)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX88_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM59079.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_10_scaffold_427_6
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5212..5853
DNA (642bp) protein (214aa)
CRISPR-associated HTH regulatory protein, Csa3 family n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9F7_METTP
CRISPR-associated DNA-binding protein
CRISPR-associated HTH regulatory protein, Csa3 family {ECO:0000313|EMBL:ABK15331.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
sw_10_scaffold_427_trna_1
unknown

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comp(5868..5951)
DNA (84bp)
transferRNA
sw_10_scaffold_427_7
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6081..6317
DNA (237bp) protein (79aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tRNA-guanine(15) transglycosylase n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z4A1_9EURY
tRNA-guanine transglycosylase
sw_10_scaffold_427_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6295..7374
DNA (1080bp) protein (360aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tRNA-guanine(15) transglycosylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU9_9EURY
tRNA-guanine transglycosylase, archaeosine-15-forming
sw_10_scaffold_427_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7526..9283
DNA (1758bp) protein (586aa)
tRNA-guanine transglycosylase, various specificities n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUI7_HALUD
tRNA-guanine transglycosylase, various specificities
tRNA-guanine transglycosylase, various specificities {ECO:0000313|EMBL:ACV12344.1}; Flags: Precursor;; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
sw_10_scaffold_427_10
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9314..9823)
DNA (510bp) protein (170aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=3 Tax=Haloferax RepID=M0FLW5_9EURY
msrA1; peptide-methionine (S)-S-oxide reductase
sw_10_scaffold_427_11

Not on your lists

10062..11117
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI000363B733
Uncharacterized protein {ECO:0000313|EMBL:KKM72687.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_10_scaffold_427_12
unknown

Not on your lists

11544..12179
DNA (636bp) protein (212aa)

This feature has no annotations

sw_10_scaffold_427_13
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12340..12834
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH00720.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
deoxycytidine triphosphate deaminase id=24622309 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
hypothetical protein
sw_10_scaffold_427_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12638..13093)
DNA (456bp) protein (152aa)
IS1341-type transposase ISNph22 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISE8_NATPD
IS1341-type transposase
IS1341-type transposase ISNph22 {ECO:0000313|EMBL:CAI48939.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_10_scaffold_427_15
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13090..13788)
DNA (699bp) protein (233aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PBZ5_9EURY
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ERG91087.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloq
IS1341-type transposase
sw_10_scaffold_427_16

Not on your lists

14108..14653
DNA (546bp) protein (182aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZUS5_9ARCH
Uncharacterized protein; Flags: Fragment;; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_10_scaffold_427_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14738..15445
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91462.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_10_scaffold_427_18
Gemella sanguinis, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15574..15888
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Gemella sanguinis M325 RepID=S2KUN2_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPC06425.1}; TaxID=562983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella sanguinis M325.
hypothetical protein; K07327 archaeal flagellar protein FlaD
sw_10_scaffold_427_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15902..16507)
DNA (606bp) protein (202aa)
CinA domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P149_HALMD
damage inducible protein CinA
CinA domain protein {ECO:0000313|EMBL:ACV49064.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
sw_10_scaffold_427_20
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16504..17772)
DNA (1269bp) protein (423aa)
DNA ligase (NAD+) {ECO:0000313|EMBL:AKH98615.1}; EC=6.5.1.2 {ECO:0000313|EMBL:AKH98615.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarc
DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3J4_HALXS
Displaying 21 items

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