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sw_10_scaffold_4346

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_4346_1
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2..307)
DNA (306bp) protein (102aa)
fabG14; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase sdr n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XAD3_9EURY
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:ELY58714.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimn
sw_10_scaffold_4346_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(326..505)
DNA (180bp) protein (60aa)
Short-chain dehydrogenase/reductase sdr n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XAD3_9EURY
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:ELY58714.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimn
oxidoreductase
sw_10_scaffold_4346_3
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(680..1075)
DNA (396bp) protein (132aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y7E9_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELY69974.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versifor
sw_10_scaffold_4346_4
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1086..1478)
DNA (393bp) protein (131aa)
3-oxoacyl-ACP reductase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HHJ5_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ELZ82544.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
short-chain dehydrogenase/reductase SDR
sw_10_scaffold_4346_5
unknown

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comp(1581..2027)
DNA (447bp) protein (149aa)

This feature has no annotations

sw_10_scaffold_4346_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2292..2699)
DNA (408bp) protein (136aa)
UPF0292 protein Mfer_0464 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY82_METFV
toprim domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
sw_10_scaffold_4346_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2897..3889
DNA (993bp) protein (331aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448, ECO:0000313|EMBL:ELZ40474.1};; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E2A5_9EURY
sw_10_scaffold_4346_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3889..4230
DNA (342bp) protein (114aa)
UPF0212 protein C451_15318 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZQ2_9EURY
UPF0212 protein C451_15318 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
hypothetical protein
sw_10_scaffold_4346_9
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4586..6298
DNA (1713bp) protein (571aa)
Phospholipase D/transphosphatidylase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W1N8_9EURY
Phospholipase D/transphosphatidylase {ECO:0000313|EMBL:ELY43404.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sul
phospholipase
sw_10_scaffold_4346_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6309..7136)
DNA (828bp) protein (276aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000313|EMBL:EMA31541.1}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000313|EMBL:EMA31541.1};; 5-enolpyruvyls
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LD90_9EURY
3-phosphoshikimate 1-carboxyvinyltransferase
sw_10_scaffold_4346_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7540..8067
DNA (528bp) protein (176aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Meth
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX3_METBF
Phosphodiesterase
sw_10_scaffold_4346_12
unknown

Not on your lists

8130..8282
DNA (153bp) protein (51aa)

This feature has no annotations

sw_10_scaffold_4346_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8352..9353)
DNA (1002bp) protein (334aa)
RecJ-like exonuclease n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJA7_HALVA
RecJ-like exonuclease {ECO:0000313|EMBL:EMA09081.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 2
recJ1; RecJ exonuclease
sw_10_scaffold_4346_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9494..10618
DNA (1125bp) protein (375aa)
Homolog to elongator complex protein ELP3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQR7_NATPD
protein acetyltransferase
Homolog to elongator complex protein ELP3 {ECO:0000313|EMBL:CAI49527.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronom
Displaying 14 items

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