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sw_10_scaffold_4697

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_4697_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1134)
DNA (1134bp) protein (378aa)
Chromosome partition protein Smc n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC03_9EURY
chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
sw_10_scaffold_4697_2
unknown

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comp(1158..1388)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_10_scaffold_4697_3
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1507..2751
DNA (1245bp) protein (415aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=2 Tax=Haloferax RepID=L5NXR0_9EURY
OB-fold nucleic acid binding domain-containing protein
sw_10_scaffold_4697_4
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2748..3683)
DNA (936bp) protein (312aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7S5_9EURY
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ELZ43881.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
sw_10_scaffold_4697_5
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4001..4198
DNA (198bp) protein (66aa)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialb
Putative ski2-type helicase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CEG0_9EURY
DEAD/DEAH box helicase
sw_10_scaffold_4697_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4149..4772
DNA (624bp) protein (208aa)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
Putative ski2-type helicase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CTM3_9EURY
superfamily ii helicase
sw_10_scaffold_4697_7

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4727..5860
DNA (1134bp) protein (378aa)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeo
Putative ski2-type helicase n=1 Tax=uncultured archaeon A07HR60 RepID=V4XUT0_9ARCH
superfamily II helicase
sw_10_scaffold_4697_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5891..6379
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NFR8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG95930.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_10_scaffold_4697_9
unknown

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6517..7485
DNA (969bp) protein (323aa)

This feature has no annotations

sw_10_scaffold_4697_10
unknown

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7482..7718
DNA (237bp) protein (79aa)

This feature has no annotations

sw_10_scaffold_4697_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7784..8398)
DNA (615bp) protein (205aa)
Uridine phosphorylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Y2_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ28164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
S-methyl-5-thioadenosine phosphorylase
sw_10_scaffold_4697_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8442..9128
DNA (687bp) protein (229aa)
Deoxyribose-phosphate aldolase {ECO:0000255|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000255|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000255|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
Deoxyribose-phosphate aldolase n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=DEOC_THETN
DeoC; deoxyribose-phosphate aldolase
sw_10_scaffold_4697_13
unknown

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comp(9131..9589)
DNA (459bp) protein (153aa)

This feature has no annotations

sw_10_scaffold_4697_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9720..10070
DNA (351bp) protein (117aa)
manB1; phosphoglucomutase/phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7P8_HALJP
Phosphoglucomutase/phosphomannomutase {ECO:0000313|EMBL:EMA29571.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ja
Displaying 14 items

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