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sw_10_scaffold_559

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_559_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..355
DNA (354bp) protein (118aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSF8_9EURY
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EFW92927.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;
pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit
sw_10_scaffold_559_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

532..2070
DNA (1539bp) protein (513aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CPL6_9EURY
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
sw_10_scaffold_559_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2140..3342
DNA (1203bp) protein (401aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.34 {ECO:0000256|RuleBase:RU361219};; TaxID=1261545 s
Hydroxymethylglutaryl-CoA reductase n=2 Tax=Halarchaeum acidiphilum RepID=U3A3H3_9EURY
3-hydroxy-3-methylglutaryl-CoA reductase
sw_10_scaffold_559_4
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3473..3949)
DNA (477bp) protein (159aa)
Heat shock protein Hsp20 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLV8_METZD
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEH60886.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhi
sw_10_scaffold_559_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4228..4968)
DNA (741bp) protein (247aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMP9_HALUD
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACV11362.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halo
sw_10_scaffold_559_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5285..5575
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PL95_9EURY
conserved hypothetical protein (DUF357)
Uncharacterized protein {ECO:0000313|EMBL:ERJ05184.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_10_scaffold_559_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5572..6249
DNA (678bp) protein (226aa)
ATP binding protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RPY2_HALTV
ATP-binding protein
ATP binding protein {ECO:0000313|EMBL:ADB60241.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain AT
sw_10_scaffold_559_8
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6344..7645
DNA (1302bp) protein (434aa)
aceB; malate synthase (EC:4.1.3.34)
Malate synthase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HB68_9EURY
Malate synthase {ECO:0000313|EMBL:ELZ81801.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
sw_10_scaffold_559_9
unknown

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comp(7694..7885)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_10_scaffold_559_10
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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8013..9275
DNA (1263bp) protein (421aa)
Transporter n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HCP2_METFS
SNF family Na+-dependent transporter
Transporter {ECO:0000256|RuleBase:RU003732}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanore
sw_10_scaffold_559_11
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9342..10361)
DNA (1020bp) protein (340aa)
aceA; isocitrate lyase (EC:2.7.8.23)
Isocitrate lyase {ECO:0000313|EMBL:AFK19771.1}; EC=2.7.8.23 {ECO:0000313|EMBL:AFK19771.1};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sour
Isocitrate lyase n=2 Tax=Haloferax mediterranei RepID=I3R6B1_HALMT
sw_10_scaffold_559_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10635..11429)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISF1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48936.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_10_scaffold_559_13
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11553..12206
DNA (654bp) protein (218aa)
Superfamily I DNA and RNA helicase and helicase subunits-like protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1A2_HALTV
Superfamily I DNA and RNA helicase and helicase subunits-like protein
Superfamily I DNA and RNA helicase and helicase subunits-like protein {ECO:0000313|EMBL:ADB63149.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrig
sw_10_scaffold_559_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12228..12752
DNA (525bp) protein (175aa)
DNA binding protein eukaryotic {ECO:0000313|EMBL:ERJ07448.1}; EC=3.6.4.- {ECO:0000313|EMBL:ERJ07448.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA binding protein eukaryotic n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PLX9_9EURY
DNA-binding protein
sw_10_scaffold_559_15
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12781..13716
DNA (936bp) protein (312aa)
Putative DNA helicase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJW0_9EURY
DNA-binding protein
Putative DNA helicase {ECO:0000313|EMBL:EMA21647.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13
sw_10_scaffold_559_16
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13775..14062
DNA (288bp) protein (96aa)
Uncharacterized protein, MTH1187 family n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IEB5_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF99926.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_559_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14170..14505
DNA (336bp) protein (112aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source
citrate synthase, partial n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B760AC
gltA; Citrate synthase
Displaying 17 items

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