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sw_10_scaffold_703

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_703_1
unknown

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222..638
DNA (417bp) protein (139aa)

This feature has no annotations

sw_10_scaffold_703_2
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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598..1044
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DZE9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40713.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
sw_10_scaffold_703_3
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2270..2554
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit L {ECO:0000313|EMBL:AKH97810.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AKH97810.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoL; DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L n=2 Tax=Haladaptatus paucihalophilus RepID=E7QRB0_9EURY
sw_10_scaffold_703_4
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2547..3083)
DNA (537bp) protein (179aa)
Putative methylase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5V2_METTP
putative methylase
Putative methylase {ECO:0000313|EMBL:ABK14076.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (
sw_10_scaffold_703_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3080..3310)
DNA (231bp) protein (77aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
ksgA; 16S rRNA methyltransferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS78_9EURY
Suspect SCG annotation. See neighboring gene [sw_10_scaffold_703_6].
sw_10_scaffold_703_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3327..3785)
DNA (459bp) protein (153aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MTT6_9EURY
ribosomal RNA small subunit methyltransferase A
sw_10_scaffold_703_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4410..5141
DNA (732bp) protein (244aa)
trx; DSBA-like thioredoxin id=24615370 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DSBA-like thioredoxin {ECO:0000313|EMBL:ESP87259.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
DsbA-like thioredoxin
sw_10_scaffold_703_8
unknown

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5198..5443
DNA (246bp) protein (82aa)

This feature has no annotations

sw_10_scaffold_703_9
unknown

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5682..5906
DNA (225bp) protein (75aa)

This feature has no annotations

sw_10_scaffold_703_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6000..7766
DNA (1767bp) protein (589aa)
cytochrome c oxidase subunit i (EC:1.9.3.1)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ADQ67880.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ADQ67880.1};; Cytochrome c oxidase, subunit i {ECO:0000313|EMBL:ELY24200.1}; Flags: Precursor;; TaxID=469382
Cytochrome c oxidase, subunit I n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQT3_HALBP
sw_10_scaffold_703_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7988..8242
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA51174.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_10_scaffold_703_12
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8243..8869)
DNA (627bp) protein (209aa)
ArsR family transcriptional regulator n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IH53_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ96100.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum A
transcriptional regulator
sw_10_scaffold_703_13
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9067..9459)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DQ31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH96872.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
sw_10_scaffold_703_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(9552..9824)
DNA (273bp) protein (91aa)
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=14425515 bin=bin1_lowGC species=Sulfolobus tokodaii genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin1_lowGC organism_group=Unknown_CP
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=CSP1_2_Dadabacteria
sw_10_scaffold_703_15
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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9922..10158
DNA (237bp) protein (79aa)
30S ribosomal protein S28e n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HIA6_METFS
ribosomal protein S28E/S33
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregu
sw_10_scaffold_703_16
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10201..10494
DNA (294bp) protein (98aa)
Protein translation factor SUI1 homolog n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R673_HALMT
tif1_1; translation initiation factor Sui1
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
sw_10_scaffold_703_17
unknown

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comp(10655..11143)
DNA (489bp) protein (163aa)

This feature has no annotations

sw_10_scaffold_703_18
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11239..11517
DNA (279bp) protein (93aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=28892 species="Archaea; Eu
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0SBB5_9EURY
sw_10_scaffold_703_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11472..12221
DNA (750bp) protein (250aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1132509 species="Archaea;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXS0_9EURY
sw_10_scaffold_703_trna_1
unknown

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12304..12378
DNA (75bp)
transferRNA
sw_10_scaffold_703_20
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12562..12762
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HB67 RepID=U1PMS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH11751.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_10_scaffold_703_21
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12759..13151
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A1Z8_9EURY
PilT protein domain protein
sw_10_scaffold_703_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13383..15182
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQP5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47059.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 23 items

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