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sw_10_scaffold_840

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_840_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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305..2200
DNA (1896bp) protein (632aa)
yumB1; NADH dehydrogenase; K03885 NADH dehydrogenase [EC:1.6.99.3] id=14632492 bin=bin9_gal15 species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
yumB1; NADH dehydrogenase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=CSP1_3_Armatimonadetes
cyclic nucleotide-binding domain-containing protein
sw_10_scaffold_840_2
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

2184..3632
DNA (1449bp) protein (483aa)
hypothetical protein id=14632493 bin=bin9_gal15 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical membrane spanning protein
sw_10_scaffold_840_3
unknown

Not on your lists

comp(3986..5011)
DNA (1026bp) protein (342aa)
hypothetical protein
sw_10_scaffold_840_4
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5321..5887
DNA (567bp) protein (189aa)
DNA-3-methyladenine glycosylase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J6I8_9EURY
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:EMA04757.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans A
alkA; DNA-3-methyladenine glycosylase
sw_10_scaffold_840_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6825..7283
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KFB4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA22492.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_10_scaffold_840_6
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7335..8612)
DNA (1278bp) protein (426aa)
Transporter n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZH4_METCG
sodium:neurotransmitter symporter family protein
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain A
sw_10_scaffold_840_7
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8880..9437)
DNA (558bp) protein (186aa)
XRE family transcriptional regulator n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NTR9_9EURY
XRE family transcriptional regulator {ECO:0000313|EMBL:EMA60000.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii
XRE family transcriptional regulator
sw_10_scaffold_840_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9537..9872
DNA (336bp) protein (112aa)
Nascent polypeptide-associated complex protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPW8_HALUD
nac; nascent polypeptide-associated complex protein
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="
sw_10_scaffold_840_9
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9898..10401)
DNA (504bp) protein (168aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VYU8_9EURY
hypothetical protein
sw_10_scaffold_840_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10403..10690)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNS6_NATM8
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCQ35630.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_10_scaffold_840_11
unknown

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comp(10721..10933)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_10_scaffold_840_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11094..12422
DNA (1329bp) protein (443aa)
4-aminobutyrate aminotransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSH5_HALBP
4-aminobutyrate aminotransferase
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ELY30045.1}; 4-aminobutyrate aminotransferase family protein {ECO:0000313|EMBL:ADQ66964.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteri
sw_10_scaffold_840_13
unknown

Not on your lists

comp(12542..12976)
DNA (435bp) protein (145aa)

This feature has no annotations

sw_10_scaffold_840_14
unknown

Not on your lists

13095..13286
DNA (192bp) protein (64aa)

This feature has no annotations

sw_10_scaffold_840_15
unknown

Not on your lists

comp(13338..13820)
DNA (483bp) protein (161aa)

This feature has no annotations

sw_10_scaffold_840_16
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14018..14197)
DNA (180bp) protein (60aa)
3-isopropylmalate dehydratase small subunit n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B4N0_9EURY
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:ELZ04594.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegy
3-isopropylmalate dehydratase, small subunit
Displaying 16 items

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