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sw_10_scaffold_1480_10

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: comp(5517..5846)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6UTN3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 102.0
  • Bit_score: 77
  • Evalue 6.90e-12
XRE family transcriptional regulator {ECO:0000313|EMBL:ENN95694.1}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="M similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 111.0
  • Bit_score: 77
  • Evalue 9.60e-12
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 110.0
  • Bit_score: 74
  • Evalue 2.80e-11

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Taxonomy

Methanocaldococcus villosus → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 330
TTGAGGGAGATAGTTGATGCTCTTCAGAGGGAGGAGGGGTATGGTGGAAACACTGTTGGATTGATAACGACGCGGCAGGCGTGTGACAAGGCTCCGAGTTCGGTGGAGGTGGATGGTGTGCAGTACAGTATAAAGCTTCTTCCGGCGCATAGCATAGAGGAAGAGATTATAAAGGGTATAAATGCCGAGAAGGATGGTGTCGACGGGATTATCTGTGGCCCGATCGCGGCGACGACTTTGGAGAAGGTGGTGGAGGTTCCGGTCGGGGGGCTCCATTTCGACAGGGAGTTGATCCAGGATTCGCTGGAATCATTTCTCCGACGCGTCTGA
PROTEIN sequence
Length: 110
LREIVDALQREEGYGGNTVGLITTRQACDKAPSSVEVDGVQYSIKLLPAHSIEEEIIKGINAEKDGVDGIICGPIAATTLEKVVEVPVGGLHFDRELIQDSLESFLRRV*