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sw_10_scaffold_1802_5

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: 4874..5467

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=572478 species="Ar similarity UNIPROT
DB: UniProtKB
  • Identity: 32.8
  • Coverage: 195.0
  • Bit_score: 103
  • Evalue 2.90e-19
2'-5' RNA ligase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QNQ4_VULDI similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 195.0
  • Bit_score: 103
  • Evalue 2.10e-19
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 195.0
  • Bit_score: 103
  • Evalue 5.90e-20

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Taxonomy

Vulcanisaeta distributa → Vulcanisaeta → Thermoproteales → Thermoprotei → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 594
ATGGCTAGAGTATTCATCGCAGTCCAGCCACCACCCTCAGTATATACGTCGATCGATCAGGTGCACAAAAAGCTGAGGTCCGCCGATCCGTCCGTAAAACCCGTGAAATCCCGTAACCTCCACGTGACAGTGAAATACCTCGGAAACAAAAACGAGATAGACACCGAGGCAGTTTCGGAGGTGGCGCGCGAAACAACCGAGAGACACAGCAAGTTCAATGTCGAACTCCGAGGATTAAGTGCTTTCCCCACCGTAGAGGAGCCACGAGATATCTGGATAGGGATAGGTGAGGGAGCTAAAGAACTCGAAGAGATACACGACGACCTACAGAGACGCCTAACTGCGATGGATTTAGCACCAAAAGACAGATGGGAGTACGCGCCACACATGACGGTCGCCCAAAAAGACGACGAAAACCAGTTCAAAGATCGACACGGAGCAGAAATACGGGGTCTGGATGGAATCCCGAAGTATATCCAGCGCGAAAACCTAGAGAACTACGGTGAATTCCAGATACGTGAAATAAAGCTCCTGAGGACGACGAAGAAGAACGGAGTGGAGCAGAACGTAGTCAGAAAGTTCGCGCTCGACTGA
PROTEIN sequence
Length: 198
MARVFIAVQPPPSVYTSIDQVHKKLRSADPSVKPVKSRNLHVTVKYLGNKNEIDTEAVSEVARETTERHSKFNVELRGLSAFPTVEEPRDIWIGIGEGAKELEEIHDDLQRRLTAMDLAPKDRWEYAPHMTVAQKDDENQFKDRHGAEIRGLDGIPKYIQRENLENYGEFQIREIKLLRTTKKNGVEQNVVRKFALD*