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sw_10_scaffold_1802

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1802_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..1761
DNA (1761bp) protein (587aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1132509 species="Archaea; Euryarc
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucyl-tRNA ligase n=2 Tax=Halococcus hamelinensis RepID=M0M6A0_9EURY
sw_10_scaffold_1802_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1807..2898)
DNA (1092bp) protein (364aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
Trans-aconitate 2-methyltransferase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ49_9EURY
tRNA methylase Trm12p Wyeosine biosynthesis
sw_10_scaffold_1802_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2892..3350)
DNA (459bp) protein (153aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P479_HALMD
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium
sw_10_scaffold_1802_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3598..4821)
DNA (1224bp) protein (408aa)
Ferredoxin--NAD(+) reductase (EC:1.18.1.3)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CD17_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ELZ19784.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" sou
sw_10_scaffold_1802_5
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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4874..5467
DNA (594bp) protein (198aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=572478 species="Ar
2'-5' RNA ligase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QNQ4_VULDI
2'-5' RNA ligase
sw_10_scaffold_1802_6
unknown

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comp(5687..6187)
DNA (501bp) protein (167aa)

This feature has no annotations

sw_10_scaffold_1802_7
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6231..6590
DNA (360bp) protein (120aa)
Cation diffusion facilitator family transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PG93_9EURY
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EMA68923.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
cation diffusion facilitator family transporter
sw_10_scaffold_1802_8
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6698..7300
DNA (603bp) protein (201aa)
thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=547558 species="Archaea; Euryarchaeot
Probable thymidylate kinase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8I1_METMS
sw_10_scaffold_1802_trna_1
unknown

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7389..7464
DNA (76bp)
transferRNA
sw_10_scaffold_1802_9
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7482..8129)
DNA (648bp) protein (216aa)
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:ELY95676.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulun
zinc finger SWIM domain-containing protein
sw_10_scaffold_1802_10
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9156..10085
DNA (930bp) protein (310aa)
MscS Mechanosensitive ion channel n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PPC3_9EURY
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EMA70725.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense
MscS Mechanosensitive ion channel
sw_10_scaffold_1802_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10168..10710)
DNA (543bp) protein (181aa)
Peptidase M50 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5U0_HALJB
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ADJ13746.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain
Displaying 12 items

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