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sw_10_scaffold_2089_7

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: 8153..8974

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase b (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 267.0
  • Bit_score: 247
  • Evalue 6.00e-63
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 267.0
  • Bit_score: 247
  • Evalue 3.00e-62
Probable tRNA pseudouridine synthase B n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPG3_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 267.0
  • Bit_score: 247
  • Evalue 2.10e-62

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 822
ATGTCGGGTCTGCTCGACGGACGCGTCGTCAACATCGACAAGCCTCGCGGACCCTCCAGCCACCAGGTCGCATCCTGGGTCGCCGACATAACGGAAGTTAAAAAAGCGTCCCATACCGGAACACTCGACCCCGTGGTTACGGGGTGCCTACCTTTCTTTCTCGGTAAAGCAAGCCGAGTAGCCGGAATGTTCCAGGGAGACGACAAGAGATATGTCTTCACGATAGAGCTACATAAAGACGTATCCCGGGGAGAGCTAGAACGGGTTCTCGACGAGTTCGAAGGCGTGATCTACCAGAAACCCCCAGTCAAGAGCGGAGTTAAACGCCGAGTTCGGAAGAGAGAGGTTTACAGCCTCGACTTGCTGGAGTTCGACGACGAAAAAAATAGAGGACTGATCGAATGTAGATGTGAGGCGGGAACCTACATAAGAAAGCTCTGTCACGACATCGGTTTGGTGATGGATACGGGGGCACATATGAAGGAGTTAAGGAGGACTGGGAGCGGCGACTTCGATGTCGAGGACTCGATCTATCTTCAGAGCTTGAAGGACGCGGTAGCGAAAGCGGAAGAGGGAGATGACAGTTTTCTTCGTGAGGTTTCGACACCTCTCTACGACGTTCTAGAAAAGAAGGGGATGGATTTCGTGGTTGTGAAGGAATCGGTTAAGGATTCGTTGTCGAACGGGAGTCCGGTATACGGTCCAGGGATAAAGAGATGTGGGGGTTCGGGTACCGTGGCGGCGGTGACGGAGTCACATGAACTGTTGGCTGTAGGGGAGATGGAGAAAGATGTTTTTCGGCCGTCGAAAGTCCTGATCTGA
PROTEIN sequence
Length: 274
MSGLLDGRVVNIDKPRGPSSHQVASWVADITEVKKASHTGTLDPVVTGCLPFFLGKASRVAGMFQGDDKRYVFTIELHKDVSRGELERVLDEFEGVIYQKPPVKSGVKRRVRKREVYSLDLLEFDDEKNRGLIECRCEAGTYIRKLCHDIGLVMDTGAHMKELRRTGSGDFDVEDSIYLQSLKDAVAKAEEGDDSFLREVSTPLYDVLEKKGMDFVVVKESVKDSLSNGSPVYGPGIKRCGGSGTVAAVTESHELLAVGEMEKDVFRPSKVLI*