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sw_10_scaffold_2089

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_2089_1
unknown

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662..1063
DNA (402bp) protein (134aa)

This feature has no annotations

sw_10_scaffold_2089_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1232..1780)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0D4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51452.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_2089_3
unknown

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2308..5286
DNA (2979bp) protein (993aa)

This feature has no annotations

sw_10_scaffold_2089_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5308..5922)
DNA (615bp) protein (205aa)
family 3 CoA transferase (EC:2.8.3.-)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4H1_9EURY
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EMA52786.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
sw_10_scaffold_2089_5
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6468..7523
DNA (1056bp) protein (352aa)
Acyl-CoA dehydrogenase 12 n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BQ86_9EURY
Acyl-CoA dehydrogenase 12 {ECO:0000313|EMBL:ELZ11819.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans
acyl-CoA dehydrogenase
sw_10_scaffold_2089_6
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7632..8153
DNA (522bp) protein (174aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
Cytidylate kinase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CIZ9_9EURY
cytidylate kinase
sw_10_scaffold_2089_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8153..8974
DNA (822bp) protein (274aa)
tRNA pseudouridine synthase b (EC:4.2.1.70)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPG3_HALBP
sw_10_scaffold_2089_8
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9018..9323)
DNA (306bp) protein (102aa)
Amino acid permease n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YC47_NATP1
Amino acid permease {ECO:0000313|EMBL:ELY71625.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 15624
amino acid permease
sw_10_scaffold_2089_9
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9353..9946)
DNA (594bp) protein (198aa)
Cationic amino acid transporter n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GTR6_HALVD
cat2; cationic amino acid transporter
Cationic amino acid transporter {ECO:0000313|EMBL:ELZ76401.1}; Flags: Fragment;; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofe
sw_10_scaffold_2089_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9925..10500)
DNA (576bp) protein (192aa)
Amino acid transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) PF5_HALBP">RepID=E4NPF5_HALBP
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:ADQ66510.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_10_scaffold_2089_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10510..10785)
DNA (276bp) protein (92aa)
Amino acid transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) PF5_HALBP">RepID=E4NPF5_HALBP
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:ADQ66510.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_10_scaffold_2089_12
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11082..11666)
DNA (585bp) protein (195aa)
Peptidase M28 n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AF79_NATGS
aminopeptidase
Peptidase M28 {ECO:0000313|EMBL:ELY72723.1}; Putative aminopeptidase {ECO:0000313|EMBL:AFZ71705.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobact
sw_10_scaffold_2089_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11743..12369)
DNA (627bp) protein (209aa)
Peptidase M28 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLZ4_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA45754.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
peptidase M28
sw_10_scaffold_2089_14

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comp(12450..13556)
DNA (1107bp) protein (369aa)
Glycine dehydrogenase (Decarboxylating) beta subunit {ECO:0000313|EMBL:ESS06145.1}; EC=1.4.4.2 {ECO:0000313|EMBL:ESS06145.1};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultur
gcvP; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine dehydrogenase (Decarboxylating) beta subunit n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZTQ9_9ARCH
Displaying 14 items

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