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sw_10_scaffold_561_14

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: 9349..10119

Top 3 Functional Annotations

Value Algorithm Source
idsA_3; trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase ) (EC:2.5.1.1 2.5.1.10 2.5.1.29) similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 256.0
  • Bit_score: 240
  • Evalue 5.30e-61
Geranylfarnesyl diphosphate synthase; Short=GFPS;; EC=2.5.1.81;; Farnesylgeranyl diphosphate synthase; Short=FGPP synthase;; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 256.0
  • Bit_score: 240
  • Evalue 2.60e-60
Geranylfarnesyl diphosphate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GFPS_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 256.0
  • Bit_score: 240
  • Evalue 1.90e-60

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 771
ATGCCTGCCGCGGTGGGGGTTGAGCTGATCCATTCGTTTTCGCTGGTCCACGACGACATAATGGATAGAGACGACTACAGGAGAGGAGTCGAAACCGTCGAGAAGCGGTGGAGTCAGCCAGCCGCGATACTCACGGGGGACTTCCTGTTTAGCCAGGGATTCAGACATATACTCGACTGCGATGTCGACGCCGAGAAGCTGGTGCGTGCCACCCAAGTCGTCTCTGATGGATGCAGCGATCTGTGTCGTGGACAGTCACTCGACATCGAGTTCGAGGAGCGACACGACGTAACCGAAGACGAATACCTCAAGATGGTGGAATGGAAGACGGCGCGTCTCTTCGATGTTGCGGGTAGCGTCGGATCTATACTGATGGATGGAAACGAAAGCGAAGTCGAGGCGTTATCGAGCTACGGCTCCAAGATGGGGAAAGCCTTCCAGATAAAAGACGACTTACTCGACATAACTAAAGAGAGAGACGTTACGGGTAAGCCGCGCGGAAGCGACCTGACCGAAAACAAAAACACATTGATCTCGATACACGCAAGAAGAAACGGAGTTGAAGTCGGTAGAGCTGGAAAGACATCTAGCCGAGACGAAGTCGAATCCCTCATCACCGAAATCAAGGAGGTGGGTTCGGTCGACTACGCAAGAGACTGTATCGACGAACTCGTGAGAGAAGCCCGTGAAGAACTCTCGGAGCTACCTGACGACGAACCCAAAAACCTCCTCTCGGACCTTACGGGGTACGTCGCCGAGAGAGAAAAATAA
PROTEIN sequence
Length: 257
MPAAVGVELIHSFSLVHDDIMDRDDYRRGVETVEKRWSQPAAILTGDFLFSQGFRHILDCDVDAEKLVRATQVVSDGCSDLCRGQSLDIEFEERHDVTEDEYLKMVEWKTARLFDVAGSVGSILMDGNESEVEALSSYGSKMGKAFQIKDDLLDITKERDVTGKPRGSDLTENKNTLISIHARRNGVEVGRAGKTSSRDEVESLITEIKEVGSVDYARDCIDELVREAREELSELPDDEPKNLLSDLTGYVAEREK*