ggKbase home page

sw_10_scaffold_561_21

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: comp(16965..17528)

Top 3 Functional Annotations

Value Algorithm Source
Sjogrens syndrome scleroderma autoantigen 1 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LRU9_HALLT similarity UNIREF
DB: UNIREF100
  • Identity: 29.4
  • Coverage: 177.0
  • Bit_score: 76
  • Evalue 4.50e-11
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 177.0
  • Bit_score: 76
  • Evalue 1.30e-11
Sjogrens syndrome scleroderma autoantigen 1 {ECO:0000313|EMBL:ACM57823.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum l similarity UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 177.0
  • Bit_score: 76
  • Evalue 6.30e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum lacusprofundi → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 564
ATGACTTCCGACGACGAAACCGACTTGATGAGCAAGTATCTCCTTAAAGGAGCTACGATGCTGGGTGAACACTGCGAAAACTGCGGCAACCCCATATTCAAACTCAAGGGAGAAAGAGTATGTCCCGTATGCACCGAAAAACAGCAACACCAGAACCAGGAGAAGACACGGAAAACACAACAGGACACAGCGAGTCCCGAGACAGAAAGTAAGACGGAAGCGAAAGACAAATCGGACGGGGAAGTCGGCAGAAGAAAGTCGAAAACCCGACATCGTGAACAGAACAATGTAAATAAAGATCGAAGCTCCTTCTCCGGTTCACCCGACGAAAAACCTAACGTCGAGGAATCCAGTGACAGAGACGCCGGAACCACCACTAAAACCGAACACTCCGATACCGACACCGAAATAGCTTACCAACAACAAGTCAAGAGGAATCTATGGGAGTCCGCCGCCAAGATCTCCGACGAAATCCGCCGATCCGAGATACCCGAAGTCAGAAAAAAGAAGCTCGAAACCCTCGACAGAACCCTATCCATCATCAAGAAATACAGCAGAGAGTGA
PROTEIN sequence
Length: 188
MTSDDETDLMSKYLLKGATMLGEHCENCGNPIFKLKGERVCPVCTEKQQHQNQEKTRKTQQDTASPETESKTEAKDKSDGEVGRRKSKTRHREQNNVNKDRSSFSGSPDEKPNVEESSDRDAGTTTKTEHSDTDTEIAYQQQVKRNLWESAAKISDEIRRSEIPEVRKKKLETLDRTLSIIKKYSRE*