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sw_10_scaffold_1509

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1509_1
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..933)
DNA (933bp) protein (311aa)
ABC-1 domain protein n=2 Tax=Haloarcula hispanica RepID=G0HWL0_HALHT
ABC-1 domain-containing protein
Membrane protein {ECO:0000313|EMBL:AJF24887.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_10_scaffold_1509_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(936..1289)
DNA (354bp) protein (118aa)
Heat shock protein 20 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNL6_9EURY
Heat shock protein 20 {ECO:0000313|EMBL:ELZ24836.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
heat shock protein 20
sw_10_scaffold_1509_3

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comp(1375..2313)
DNA (939bp) protein (313aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=uncultured archaeon A07HR67 PF1_9ARCH">RepID=V4ZPF1_9ARCH
undecaprenyl diphosphate synthase
sw_10_scaffold_1509_4
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2421..2615
DNA (195bp) protein (65aa)
Cold shock protein n=2 Tax=Halarchaeum acidiphilum RepID=U3A787_9EURY
cold-shock protein
Cold shock protein {ECO:0000313|EMBL:GAD53539.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_10_scaffold_1509_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2772..3065
DNA (294bp) protein (98aa)
Protein translation factor SUI1 homolog n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ73_HALMD
translation initiation factor Sui1
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_10_scaffold_1509_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3073..3693)
DNA (621bp) protein (207aa)
Probable GTP-binding protein EngB n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ70_9EURY
engB; GTP-binding protein EngB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
sw_10_scaffold_1509_7
unknown

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comp(4202..4615)
DNA (414bp) protein (138aa)

This feature has no annotations

sw_10_scaffold_1509_8

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4791..5090
DNA (300bp) protein (100aa)
TIGR00341 family protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X9J4_9ARCH
TIGR00341 family protein {ECO:0000313|EMBL:ESS04479.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_10_scaffold_1509_9
unknown

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comp(5162..5284)
DNA (123bp) protein (41aa)

This feature has no annotations

sw_10_scaffold_1509_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5410..6375)
DNA (966bp) protein (322aa)
GTP-binding protein HSR1-related n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMM2_HALUD
GTP-binding protein HSR1-related
GTP-binding protein HSR1-related {ECO:0000313|EMBL:ACV11335.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahen
sw_10_scaffold_1509_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6465..6767)
DNA (303bp) protein (101aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020};; TaxID=1417673 species="Archaea; E
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Haloarcula hispanica RepID=G0HS52_HALHT
phosphoribosyl-ATP pyrophosphatase
sw_10_scaffold_1509_12
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6832..7350)
DNA (519bp) protein (173aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Halobacterium sp. DL1 RepID=G4IAV2_9EURY
glutamine amidotransferase
sw_10_scaffold_1509_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7457..8380)
DNA (924bp) protein (308aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KK17_9EURY
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EMA21712.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" sourc
transporter rbh
sw_10_scaffold_1509_14

Not on your lists

comp(8540..9148)
DNA (609bp) protein (203aa)
Riboflavin synthase alpha chain {ECO:0000313|EMBL:ESS04472.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ESS04472.1};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0M5_9ARCH
sw_10_scaffold_1509_15
unknown

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comp(9216..9311)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_10_scaffold_1509_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9486..10619)
DNA (1134bp) protein (378aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY00_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ELZ27488.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
sw_10_scaffold_1509_17
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10744..11700
DNA (957bp) protein (319aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AKH98159.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AKH98159.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JFE2_9EURY
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
sw_10_scaffold_1509_18
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11749..11955)
DNA (207bp) protein (69aa)
Ferredoxin n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T202_NATMM
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ADD07611.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 / DSM 3394
sw_10_scaffold_1509_19
unknown

Not on your lists

12082..12168
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 19 items

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