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sw_10_scaffold_1568

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1568_1
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..861
DNA (861bp) protein (287aa)
NADH/Ubiquinone/plastoquinone (complex I) (EC:1.6.99.5)
NADH dehydrogenase n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZBQ9_9EURY
NADH dehydrogenase {ECO:0000313|EMBL:ELY83844.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_10_scaffold_1568_2
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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858..1544
DNA (687bp) protein (229aa)
Cation antiporter n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LT24_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02395.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_1568_3
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1534..1830
DNA (297bp) protein (99aa)
Multiple resistance and pH regulation protein F n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LT25_HALLT
pH regulation protein F
pH regulation protein F {ECO:0000313|EMBL:AHG02394.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_1568_4
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1833..2243
DNA (411bp) protein (137aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JLW8_NATP1
monovalent cation/proton antiporter, MnhG/PhaG subunit
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:AGB31346.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrin
sw_10_scaffold_1568_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2531..3937)
DNA (1407bp) protein (469aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=797114 species="Archaea; Euryar
Fumarate hydratase class II n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW59_9EURY
fumC; fumarate hydratase
sw_10_scaffold_1568_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4026..5006)
DNA (981bp) protein (327aa)
flap endonuclease 1 (EC:3.-.-.-)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CUF5_9EURY
sw_10_scaffold_1568_7
unknown

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5093..5182
DNA (90bp) protein (30aa)

This feature has no annotations

sw_10_scaffold_1568_8

Not on your lists

comp(5270..5977)
DNA (708bp) protein (236aa)
Cell surface glycoprotein n=1 Tax=uncultured organism RepID=M1P2K9_9ZZZZ
Cell surface glycoprotein {ECO:0000313|EMBL:AGF93656.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hcp1; halocyanin-like protein
sw_10_scaffold_1568_9
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6081..6827
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H6E7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR48813.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_10_scaffold_1568_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6878..7771
DNA (894bp) protein (298aa)
Glucose-methanol-choline family oxidoreductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSU0_9EURY
Glucose-methanol-choline family oxidoreductase {ECO:0000313|EMBL:EFW92499.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Hal
glucose-methanol-choline oxidoreductase
sw_10_scaffold_1568_11
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7768..8307
DNA (540bp) protein (180aa)
Glucose-methanol-choline family oxidoreductase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V4K7_HALMA
glucose-methanol-choline family oxidoreductase
Glucose-methanol-choline family oxidoreductase {ECO:0000313|EMBL:AAV45545.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
sw_10_scaffold_1568_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8450..8692)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D4Y6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29767.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_10_scaffold_1568_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8818..9360
DNA (543bp) protein (181aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QUS9_9EURY
hypothetical protein
sw_10_scaffold_1568_14
unknown

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9734..10297
DNA (564bp) protein (188aa)

This feature has no annotations

sw_10_scaffold_1568_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10410..10943
DNA (534bp) protein (178aa)
Transcription factor E n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J2H1_HALVA
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
transcription factor
sw_10_scaffold_1568_16
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11489..12253
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KWE3_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA24524.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_10_scaffold_1568_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12331..12732
DNA (402bp) protein (134aa)
Molybdopterin binding domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXL1_HALMD
molybdopterin binding domain-containing protein
Molybdopterin binding domain protein {ECO:0000313|EMBL:ACV48445.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobiu
sw_10_scaffold_1568_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12729..12974
DNA (246bp) protein (82aa)
Competence-damage protein CinA {ECO:0000313|EMBL:ERJ07727.1}; EC=2.7.7.2 {ECO:0000313|EMBL:ERJ07727.1};; Molybdopterin binding domain protein {ECO:0000313|EMBL:CCQ32615.1}; TaxID=1033806 species="Arch
Competence-damage protein CinA n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PN18_9EURY
molybdopterin binding domain protein
sw_10_scaffold_1568_19
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13174..14253
DNA (1080bp) protein (360aa)
ATP-NAD/AcoX kinase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KRT1_9EURY
ATP-NAD/AcoX kinase {ECO:0000313|EMBL:EMA22914.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 1355
N-acetylglucosamine-1-phosphate uridyltransferase
Displaying 19 items

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