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sw_10_scaffold_2006

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_2006_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..547
DNA (546bp) protein (182aa)
Putative RNA methylase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQC2_HALVA
Putative RNA methylase {ECO:0000313|EMBL:EMA11196.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
RNA methyltransferase
sw_10_scaffold_2006_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(548..1633)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45017.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
rhomboid family protein
sw_10_scaffold_2006_3
unknown

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comp(2241..2933)
DNA (693bp) protein (231aa)

This feature has no annotations

sw_10_scaffold_2006_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2944..3579)
DNA (636bp) protein (212aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929};; 5-(carboxyam
Phosphoribosylaminoimidazole carboxylase, catalytic subunit n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTQ4_HALUD
phosphoribosylaminoimidazole carboxylase, catalytic subunit
sw_10_scaffold_2006_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4030..5175)
DNA (1146bp) protein (382aa)
purK; phosphoribosylaminoimidazole carboxylase ATP binding subunit (EC:6.3.4.18)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LIF2_HALJP
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
sw_10_scaffold_2006_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5209..6915)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037C2DEA
dolichyl-phosphate-mannose-protein mannosyltransferase
Dolichyl-phosphate-mannose-proteinmannosyltransf erase {ECO:0000313|EMBL:ACV48026.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" so
sw_10_scaffold_2006_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7023..7439
DNA (417bp) protein (139aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|RuleBase:RU003795}; EC=2.5.1.78 {ECO:0000256|RuleBase:RU003795};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J167_HALVA
6,7-dimethyl-8-ribityllumazine synthase
sw_10_scaffold_2006_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7436..8590
DNA (1155bp) protein (385aa)
Aspartate aminotransferase {ECO:0000313|EMBL:EMA32855.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EMA32855.1};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
Aspartate aminotransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLG2_HALJP
aspartate aminotransferase
sw_10_scaffold_2006_9
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8600..9808)
DNA (1209bp) protein (403aa)
Amino acid permease-associated region n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LU64_HALLT
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:ACM58258.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacuspr
Displaying 9 items

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