ggKbase home page

sw_10_scaffold_2442

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_2442_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
Putative permease n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHU6_9EURY
Putative permease {ECO:0000313|EMBL:EMA19734.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.
permease
sw_10_scaffold_2442_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(493..798)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ID45_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG04981.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_10_scaffold_2442_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(884..1156)
DNA (273bp) protein (91aa)
Transcriptional regulator, arsr family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MYD1_9EURY
Transcriptional regulator, arsr family protein {ECO:0000313|EMBL:EMA50328.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
ArsR family transcriptional regulator
sw_10_scaffold_2442_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1250..1672)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LN98_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34981.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_10_scaffold_2442_5
unknown

Not on your lists

1788..2438
DNA (651bp) protein (217aa)

This feature has no annotations

sw_10_scaffold_2442_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2485..2946
DNA (462bp) protein (154aa)
dcd3; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JSX9_HALVA
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:EMA10800.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
sw_10_scaffold_2442_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3158..3739
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6T8_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28823.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_10_scaffold_2442_8
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3682..4083
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H517_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ79575.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_10_scaffold_2442_9
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4176..4574
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9Y1H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY66733.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_10_scaffold_2442_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4664..4954
DNA (291bp) protein (97aa)
Translation initiation factor 1A n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZS5_HALMD
translation initiation factor eIF-1A
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
sw_10_scaffold_2442_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5013..5885
DNA (873bp) protein (291aa)
non-specific serine/threonine protein kinase (EC:2.7.11.1)
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:ACV46832.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACV46832.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Non-specific serine/threonine protein kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZS4_HALMD
sw_10_scaffold_2442_12
unknown

Not on your lists

comp(5969..6688)
DNA (720bp) protein (240aa)

This feature has no annotations

sw_10_scaffold_2442_13
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7398..7910)
DNA (513bp) protein (171aa)
coaD1; phosphopantetheine adenylyltransferase/pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000313|EMBL:AHZ24399.1}; EC=2.7.7.3 {ECO:0000313|EMBL:ELZ97140.1};; Phosphopantetheine adenylyltransferase / pantetheine-phosphate adenylyltransferase {ECO
Phosphopantetheine adenylyltransferase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RBE1_HALMT
sw_10_scaffold_2442_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7992..8603
DNA (612bp) protein (204aa)
Flavoprotein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D006_9EURY
Flavoprotein {ECO:0000313|EMBL:ELZ27469.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
metallo-beta-lactamase
sw_10_scaffold_2442_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8629..8778)
DNA (150bp) protein (50aa)
rpl40e; 50S ribosomal protein L40e; K02927 large subunit ribosomal protein L40e id=24644140 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl40e; 50S ribosomal protein L40
sw_10_scaffold_2442_16
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8900..10003
DNA (1104bp) protein (368aa)
cysteine desulfurase (EC:2.8.1.7) id=24634893 bin=Halorubrum_J07HR59 species=Halorubrum sp. J07HR59 genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halorubrum_J07HR59
csd2; cysteine desulfurase (EC:4.4.1.-)
Selenocysteine lyase {ECO:0000313|EMBL:ERH04919.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
sw_10_scaffold_2442_17
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10238..10630
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YSI1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY76427.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_10_scaffold_2442_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10667..11278)
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E5I2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ07201.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_10_scaffold_2442_19

Not on your lists

comp(11388..11954)
DNA (567bp) protein (189aa)
Dihydrofolate reductase {ECO:0000313|EMBL:ESS04087.1}; EC=1.5.1.3 {ECO:0000313|EMBL:ESS04087.1};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
dihydrofolate reductase region (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XZM1_9ARCH
sw_10_scaffold_2442_20
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11957..13138)
DNA (1182bp) protein (394aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LHN7_HALJP
Thymidylate synthase {ECO:0000313|EMBL:EMA31495.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;
sw_10_scaffold_2442_21
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13247..13795)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IE56_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03789.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_10_scaffold_2442_22
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13956..14486)
DNA (531bp) protein (177aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RXJ5_HALTV
AsnC family transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADB61719.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
sw_10_scaffold_2442_23
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14537..14935)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RSA8_HALTV
Uncharacterized protein {ECO:0000313|EMBL:ADB60689.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
hypothetical protein
sw_10_scaffold_2442_24
unknown

Not on your lists

comp(15022..15129)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 24 items

View Taxonomy