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sw_10_scaffold_2902

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_2902_1
unknown

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3..164
DNA (162bp) protein (54aa)

This feature has no annotations

sw_10_scaffold_2902_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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198..434
DNA (237bp) protein (79aa)
CopG family transcriptional regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXR7_9EURY
CopG family transcriptional regulator {ECO:0000313|EMBL:EMA37958.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
transcriptional regulators, CopG/Arc/MetJ family
sw_10_scaffold_2902_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(448..861)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HX68_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB65480.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_10_scaffold_2902_4
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(935..1627)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JVQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA13041.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_10_scaffold_2902_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1775..2383
DNA (609bp) protein (203aa)
Fosfomycin resistance protein FofB n=2 Tax=Haloarcula hispanica RepID=G0HX70_HALHT
fosmidomycin resistance protein
Fosmidomycin resistance protein {ECO:0000313|EMBL:AHB65482.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanic
sw_10_scaffold_2902_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2414..2635)
DNA (222bp) protein (74aa)
50S ribosomal protein L21e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSS7_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
50S ribosomal protein L21e
sw_10_scaffold_2902_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2743..3009)
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJJ7_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=122748
ef1B; elongation factor 1-beta
sw_10_scaffold_2902_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3011..3190)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBF7_9EURY
RNA-binding protein {ECO:0000313|EMBL:AHG04210.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Zn-ribbon RNA-binding protein
sw_10_scaffold_2902_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3263..4069)
DNA (807bp) protein (269aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTE2_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ25682.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
hbd4; 3-hydroxyacyl-CoA dehydrogenase
sw_10_scaffold_2902_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4162..4869)
DNA (708bp) protein (236aa)
Rhodopsin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUW1_9EURY
Rhodopsin {ECO:0000313|EMBL:ELZ25684.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
sensory rhodopsin
sw_10_scaffold_2902_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4872..7181)
DNA (2310bp) protein (770aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL9_HALMD
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACV48787.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Ha
sw_10_scaffold_2902_12
unknown

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comp(7269..7589)
DNA (321bp) protein (107aa)

This feature has no annotations

sw_10_scaffold_2902_13
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7611..8312)
DNA (702bp) protein (234aa)
Glycerophosphodiester phosphodiesterase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IGT3_9EURY
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CQR53572.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp
ugpQ; glycerophosphodiester phosphodiesterase
sw_10_scaffold_2902_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9283..9741
DNA (459bp) protein (153aa)
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL id=24648231 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
mutL; DNA mismatch repair protein, MutL family
Displaying 14 items

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