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sw_10_scaffold_3352

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_3352_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..606)
DNA (606bp) protein (202aa)
3-hydroxy-3-methylglutaryl-CoA reductase (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.34 {ECO:0000256|RuleBase:RU361219};; TaxID=485914 sp
3-hydroxy-3-methylglutaryl-CoA reductase n=1 Tax=Halomicrobium katesii RepID=UPI0003804685
sw_10_scaffold_3352_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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696..2267
DNA (1572bp) protein (524aa)
hypothetical protein id=24647956 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ERH09083.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
Amidohydrolase 3
sw_10_scaffold_3352_3
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2275..3588)
DNA (1314bp) protein (438aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AMP6_9EURY
protoheme IX farnesyltransferase
sw_10_scaffold_3352_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3666..4256)
DNA (591bp) protein (197aa)
phosphoglycolate phosphatase n=1 Tax=Halomicrobium katesii RepID=UPI000378D43F
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ACV48196.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
sw_10_scaffold_3352_5
unknown

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4527..4931
DNA (405bp) protein (135aa)

This feature has no annotations

sw_10_scaffold_3352_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4999..5280
DNA (282bp) protein (94aa)
50S ribosomal protein L44e n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKW5_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl44e; 50S ribosomal protein L44
sw_10_scaffold_3352_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5283..5456
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPB9_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
30S ribosomal protein S27e
sw_10_scaffold_3352_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5453..6253
DNA (801bp) protein (267aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IWG7_HALVA
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=662477 species="Arch
eif2A; translation initiation factor IF-2 subunit alpha
sw_10_scaffold_3352_9
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6279..6461
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6T1_HALJP
zn-ribbon RNA-binding protein
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ja
sw_10_scaffold_3352_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6467..7219
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6N0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29252.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
3-isopropylmalate dehydratase
sw_10_scaffold_3352_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7115..8617)
DNA (1503bp) protein (501aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA CCA-pyrophosphorylase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F0_9EURY
sw_10_scaffold_3352_trna_1
unknown

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8711..8813
DNA (103bp)
transferRNA
sw_10_scaffold_3352_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9070..9963)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P5Z5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERG88962.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_10_scaffold_3352_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10003..10335)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IY83_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA01003.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
Displaying 14 items

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