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sw_10_scaffold_560

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_560_1

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comp(1..555)
DNA (555bp) protein (185aa)
Putative ornithine cyclodeaminase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XQX9_9ARCH
Putative ornithine cyclodeaminase {ECO:0000313|EMBL:ESS04548.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
putative ornithine cyclodeaminase, mu-crystallin
sw_10_scaffold_560_2
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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651..1811
DNA (1161bp) protein (387aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9V4_HALRX
glycine/D-amino acid oxidase, deaminating
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:AGB15021.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (
sw_10_scaffold_560_3
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2292..3932)
DNA (1641bp) protein (547aa)
Thiamine pyrophosphate central domain-containing protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BJF0_9EURY
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
Thiamine pyrophosphate central domain-containing protein {ECO:0000313|EMBL:ELZ10996.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="H
sw_10_scaffold_560_4
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4031..4795)
DNA (765bp) protein (255aa)
Transcriptional regulator, IclR family n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YU20_9EURY
Transcriptional regulator, IclR family {ECO:0000313|EMBL:GAD52505.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
IclR family transcriptional regulator
sw_10_scaffold_560_5
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4913..6073
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WDV6_9EURY
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ELY46488.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natro
acyl-CoA dehydrogenase
sw_10_scaffold_560_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6078..7292
DNA (1215bp) protein (405aa)
crotonobetainyl-CoA:carnitine CoA-transferase/alpha-methylacyl-CoA racemase 1 (EC:2.8.3.- 5.1.99.4)
Crotonobetainyl-CoA:carnitine CoA-transferase /alpha-methylacyl-CoA racemase 1 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N1D8_HALMO
Crotonobetainyl-CoA:carnitine CoA-transferase /alpha-methylacyl-CoA racemase 1 {ECO:0000313|EMBL:EMA51671.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
sw_10_scaffold_560_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7804..8655)
DNA (852bp) protein (284aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1G6_9EURY
sw_10_scaffold_560_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8722..10629)
DNA (1908bp) protein (636aa)
TrkA-N domain family protein n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8N4_HALJB
TrkA-N domain family protein
TrkA-N domain family protein {ECO:0000313|EMBL:ADJ14219.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus je
sw_10_scaffold_560_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10753..11067)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6W7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44054.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
periplasmic binding protein
sw_10_scaffold_560_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11105..11662)
DNA (558bp) protein (186aa)
ABC transporter substrate-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KS54_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA24056.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
iron ABC transporter substrate-binding protein
sw_10_scaffold_560_11
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11980..12456
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BAZ1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB30606.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_10_scaffold_560_12
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12502..13245)
DNA (744bp) protein (248aa)
Putative glutamine ABC transporter ATP-binding protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J8Y5_9EURY
glnQ; putative glutamine ABC transporter ATP-binding protein
Putative glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA04185.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Ha
sw_10_scaffold_560_13
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13242..14123)
DNA (882bp) protein (294aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=halophilic archaeon J07HB67 RepID=U1R0B8_9EURY
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:ERH11727.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" s
ABC-type transport system permease protein (probable substrate glutamine/glutamate/polar amino acids)
sw_10_scaffold_560_14
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14264..15031)
DNA (768bp) protein (256aa)
ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTV1_9EURY
ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein {ECO:0000313|EMBL:CDK38643.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Ha
ABC-type transport system periplasmic substrate-binding protein (probable substrate glutamine/glutamate/polar amino acids)
sw_10_scaffold_560_15
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(15284..16036)
DNA (753bp) protein (251aa)
Molybdopterin binding domain protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PDQ0_9EURY
Molybdopterin binding domain protein {ECO:0000313|EMBL:EMA67654.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidinge
molybdopterin binding domain protein
sw_10_scaffold_560_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16036..16281)
DNA (246bp) protein (82aa)
Ferredoxin n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JND4_HALVA
Ferredoxin {ECO:0000313|EMBL:EMA09469.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
hypothetical protein
sw_10_scaffold_560_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16392..17090
DNA (699bp) protein (233aa)
PHP domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVX0_HALMD
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:ACV48099.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (stra
sw_10_scaffold_560_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17328..17531)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGH4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ33863.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_10_scaffold_560_19
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17579..18178)
DNA (600bp) protein (200aa)
Chemotaxis protein CheC n=3 Tax=Haloarcula RepID=Q5V2Q2_HALMA
cheC2; chemotaxis protein CheC
Chemotaxis protein CheC {ECO:0000313|EMBL:AAV46200.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_10_scaffold_560_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18290..18661
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEU1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21775.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_560_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18734..19966
DNA (1233bp) protein (411aa)
lysine-ketoglutarate reductase/saccharopine dehydrogenase (EC:1.5.1.10 1.5.1.7)
LOR/SDH bifunctional protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUV1_9EURY
LOR/SDH bifunctional protein {ECO:0000313|EMBL:ELZ27006.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
sw_10_scaffold_560_22
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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20021..20449
DNA (429bp) protein (143aa)
OsmC-like protein superfamily protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9Y0T6_9EURY
OsmC-like protein superfamily protein {ECO:0000313|EMBL:ELY66468.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus je
putative redox protein, regulator of disulfide bond formation
sw_10_scaffold_560_23
unknown

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comp(21160..21954)
DNA (795bp) protein (265aa)

This feature has no annotations

sw_10_scaffold_560_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(22471..24177)
DNA (1707bp) protein (569aa)
Ferredoxin-nitrite reductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L770_HALJP
Ferredoxin-nitrite reductase {ECO:0000313|EMBL:EMA28938.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
nitrite and sulfite reductase 4Fe-4S domain-containing protein
sw_10_scaffold_560_25
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(24468..26192)
DNA (1725bp) protein (575aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLK2_HALJP
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:EMA33963.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source=
PAS sensor protein
sw_10_scaffold_560_26
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(26196..27449)
DNA (1254bp) protein (418aa)
Htr-like protein n=2 Tax=Halobacterium salinarum RepID=O51970_HALSA
htlD; Htr-like protein
Htr-like protein {ECO:0000313|EMBL:AAG20731.1}; Uncharacterized protein {ECO:0000313|EMBL:AAC82814.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
sw_10_scaffold_560_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(27585..28580)
DNA (996bp) protein (332aa)
Signal recognition particle receptor FtsY n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D291_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
cell division protein FtsY
sw_10_scaffold_560_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(28584..29036)
DNA (453bp) protein (151aa)
Prefoldin subunit alpha n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNV3_NATM8
pfdA; prefoldin alpha subunit
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
sw_10_scaffold_560_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(29033..29206)
DNA (174bp) protein (58aa)
50S ribosomal protein L18Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D464_9EURY
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=797114 sp
rplX; 50S ribosomal protein LX
sw_10_scaffold_560_30
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(29275..29439)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R6Q3_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG20126.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
Displaying items 1-30 of 35 in total

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