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sw_10_scaffold_778

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_778_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..104)
DNA (102bp) protein (34aa)
class V aminotransferase; K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Aminotransferase class V {ECO:0000313|EMBL:ADJ14058.1}; Class V aminotransferase {ECO:0000313|EMBL:ELY33898.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
sw_10_scaffold_778_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1356..2120)
DNA (765bp) protein (255aa)
Beta-lactamase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3L0_9EURY
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EMA52456.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
hypothetical protein
sw_10_scaffold_778_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2376..2669
DNA (294bp) protein (98aa)
Uncharacterized protein n=6 Tax=Haloarcula RepID=G0HQ47_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB66896.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_10_scaffold_778_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2706..3881)
DNA (1176bp) protein (392aa)
Beta-lactamase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ58_HALMD
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ACV46744.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_10_scaffold_778_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4009..4638
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D877_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30364.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
transcription anti-termination factor
sw_10_scaffold_778_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4707..6296
DNA (1590bp) protein (530aa)
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:EMA20968.1}; EC=6.1.1.20 {ECO:0000313|EMBL:EMA20968.1};; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Phenylalanyl-tRNA ligase subunit alpha n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KJ94_HALAR
phenylalanyl-tRNA synthetase subunit alpha
sw_10_scaffold_778_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6296..8038
DNA (1743bp) protein (581aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JKX3_HALVA
sw_10_scaffold_778_8
unknown

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comp(7947..8936)
DNA (990bp) protein (330aa)

This feature has no annotations

sw_10_scaffold_778_9
unknown

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8938..9105
DNA (168bp) protein (56aa)

This feature has no annotations

sw_10_scaffold_778_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9112..10578)
DNA (1467bp) protein (489aa)
Replication factor C large subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ93_9EURY
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256
replication factor C large subunit
sw_10_scaffold_778_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10811..11515)
DNA (705bp) protein (235aa)
CDP-alcohol phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] id=24654682 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Phosphatidylserine synthase {ECO:0000313|EMBL:ERG89650.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
CDP-alcohol phosphatidyltransferase
sw_10_scaffold_778_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11551..12354)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23755.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_778_13

Not on your lists

12627..12986
DNA (360bp) protein (120aa)
Cell surface glycoprotein n=1 Tax=uncultured organism RepID=M1P2K9_9ZZZZ
Cell surface glycoprotein {ECO:0000313|EMBL:AGF93656.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
cell surface glycoprotein
sw_10_scaffold_778_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13008..13892)
DNA (885bp) protein (295aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
Phosphoenolpyruvate synthase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LT13_9EURY
phosphoenolpyruvate synthase
sw_10_scaffold_778_15
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13889..15238)
DNA (1350bp) protein (450aa)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:AFZ74186.1}; EC=2.7.9.2 {ECO:0000313|EMBL:ELY63642.1};; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronob
Phosphoenolpyruvate synthase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AK77_NATGS
phosphoenolpyruvate synthase
sw_10_scaffold_778_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15307..16230)
DNA (924bp) protein (308aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JCC3_HALVA
Diaminopimelate epimerase {ECO:0000313|EMBL:EMA06777.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis AT
sw_10_scaffold_778_17
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16300..16746
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U2Y5_9EURY
acyl-CoA thioester hydrolase
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:AHB65612.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N
sw_10_scaffold_778_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16756..17562
DNA (807bp) protein (269aa)
gch3; GTP cyclohydrolase III (EC:3.5.4.29) id=24645100 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_10_scaffold_778_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17571..18752)
DNA (1182bp) protein (394aa)
ABC-type transport system ATP-binding protein (Probable substrate cobalamin) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) PF1_NATPD">RepID=Q3IPF1_NATPD
btuD; corrinoid ABC transporter ATPase
ABC-type transport system ATP-binding protein (Probable substrate cobalamin) {ECO:0000313|EMBL:CAI50000.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
sw_10_scaffold_778_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18749..19792)
DNA (1044bp) protein (348aa)
ABC-type transport system permease protein (Probable substrate cobalamin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL79_NATM8
btuC; ABC-type transport system permease protein (probable substrate cobalamin)
ABC-type transport system permease protein (Probable substrate cobalamin) {ECO:0000313|EMBL:CCQ37234.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_10_scaffold_778_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19895..20884
DNA (990bp) protein (330aa)
Periplasmic binding protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0A4_HALMD
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ACV48896.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Ha
sw_10_scaffold_778_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21309..23006
DNA (1698bp) protein (566aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=797114 species="Archaea; Euryarchaeo
DNA topoisomerase 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEE5_9EURY
DNA topoisomerase I
sw_10_scaffold_778_23
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23065..23427
DNA (363bp) protein (121aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:ELY78171.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1227495
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BU91_9EURY
sw_10_scaffold_778_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


23672..24973
DNA (1302bp) protein (434aa)
Aspartate--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAE2_9EURY
Aspartyl-tRNA ligase {ECO:0000313|EMBL:ELZ20266.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
aspC; aspartate--tRNA ligase
sw_10_scaffold_778_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24992..26725)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y2T8_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36836.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_10_scaffold_778_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(26779..27477)
DNA (699bp) protein (233aa)
PAS/PAC sensor signal transduction histidine kinase id=24613860 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ESP89646.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.
htlD25; HTR-like protein
Displaying 26 items

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