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sw_10_scaffold_967

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_967_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..159
DNA (159bp) protein (53aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
tryptophan synthase subunit beta n=1 Tax=Halomicrobium katesii RepID=UPI000376B826
sw_10_scaffold_967_2
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

159..1028
DNA (870bp) protein (290aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KBW5_9EURY
sw_10_scaffold_967_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1099..1905
DNA (807bp) protein (269aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Predicted phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ACV49141.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ACV49141.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
Predicted phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1Q1_HALMD
sw_10_scaffold_967_4
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1976..2272)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H1A7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR53468.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_10_scaffold_967_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2275..2550)
DNA (276bp) protein (92aa)
transcriptional regulator id=24644090 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERH08321.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ArsR family transcriptional regulator
sw_10_scaffold_967_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2777..3517)
DNA (741bp) protein (247aa)
ArsR family transcriptional regulator id=24655093 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Putative transcriptional regulator {ECO:0000313|EMBL:ERG89987.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
transcriptional regulator-like family, ArsR family protein
sw_10_scaffold_967_7
unknown

Not on your lists

comp(3614..3703)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_10_scaffold_967_8
unknown

Not on your lists

3936..4076
DNA (141bp) protein (47aa)

This feature has no annotations

sw_10_scaffold_967_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4123..5292
DNA (1170bp) protein (390aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000256|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000256|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMP3_HALUD
3-dehydroquinate synthase
sw_10_scaffold_967_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5294..5749)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49466.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_967_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5775..6116)
DNA (342bp) protein (114aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE82_9EURY
3-dehydroquinate dehydratase
sw_10_scaffold_967_12
unknown

Not on your lists

6173..6496
DNA (324bp) protein (108aa)

This feature has no annotations

sw_10_scaffold_967_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6451..7422)
DNA (972bp) protein (324aa)
Transcription initiation factor IIB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1P5_HALMD
transcription factor TFIIB cyclin-related protein
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_10_scaffold_967_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7630..9444)
DNA (1815bp) protein (605aa)
Dolichol-P-glucose synthetase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJK3_HALJP
Dolichol-P-glucose synthetase {ECO:0000313|EMBL:EMA33711.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica D
glycosyl transferase
sw_10_scaffold_967_15
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9493..9684)
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V2D0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA16247.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_10_scaffold_967_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9886..10701)
DNA (816bp) protein (272aa)
Regulatory protein Crp n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEY3_9EURY
Regulatory protein Crp {ECO:0000313|EMBL:EMA56411.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
regulatory protein Crp
sw_10_scaffold_967_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11044..11694
DNA (651bp) protein (217aa)
Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N974_9EURY
Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit {ECO:0000313|EMBL:EMA53205.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit
sw_10_scaffold_967_18
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11691..12500
DNA (810bp) protein (270aa)
cbiL; cobalt-precorrin-2 C(20)-methyltransferase (EC:2.1.1.151)
Cobalt-precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:EMA00605.1}; EC=2.1.1.151 {ECO:0000313|EMBL:EMA00605.1};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Cobalt-precorrin-2 C(20)-methyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYS3_HALVA
sw_10_scaffold_967_19

Not on your lists

13090..13314
DNA (225bp) protein (75aa)
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:ESS10110.1}; EC=2.1.1.133 {ECO:0000313|EMBL:ESS10110.1};; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN
precorrin-4 C(11)-methyltransferase (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase n=1 Tax=uncultured archaeon A07HN63 RepID=V5A3R4_9ARCH
sw_10_scaffold_967_20
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13317..14333
DNA (1017bp) protein (339aa)
Cobalt-precorrin-5A hydrolase {ECO:0000313|EMBL:CAP14123.1}; EC=3.7.1.12 {ECO:0000313|EMBL:CAP14123.1};; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Cobalt-precorrin 5A hydrolase n=2 Tax=Halobacterium salinarum RepID=B0R5V6_HALS3
cbiG; cobalamin biosynthesis protein CbiG
sw_10_scaffold_967_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14335..14661
DNA (327bp) protein (109aa)
precorrin-3B C(17)-methyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000367FFD5
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase {ECO:0000313|EMBL:ELZ33920.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeom
precorrin-3B C(17)-methyltransferase
sw_10_scaffold_967_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14661..15161
DNA (501bp) protein (167aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4G2_HALMD
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase {ECO:0000313|EMBL:ACV47984.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halom
sw_10_scaffold_967_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15161..16093
DNA (933bp) protein (311aa)
Precorrin-3B C17-methyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4G1_HALMD
precorrin-3B C(17)-methyltransferase
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:ACV47983.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_10_scaffold_967_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16093..16389
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LAR6_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29030.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
cobalamin biosynthesis protein
sw_10_scaffold_967_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16380..17054
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT88_NATPD
cobalamin operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48646.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_10_scaffold_967_26
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17051..18307
DNA (1257bp) protein (419aa)
Colbalt chelase thioredoxin n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KEJ5_9EURY
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AJF25894.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_10_scaffold_967_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18391..18762
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56401.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_967_28
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18774..19796
DNA (1023bp) protein (341aa)
Tup1 like transcriptional repressor n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHI6_9EURY
Tup1 like transcriptional repressor {ECO:0000313|EMBL:EMA19614.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amyl
transcriptional regulator
Displaying 28 items

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