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sw_10_scaffold_165

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_165_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..2156)
DNA (2154bp) protein (718aa)
Blue (Type 1) copper domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBP6_SPILD
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:AHM63038.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.
blue (type 1) copper domain-containing protein
sw_10_scaffold_165_2
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2282..4261)
DNA (1980bp) protein (660aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037D30CD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD02307.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
sw_10_scaffold_165_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4871..5554)
DNA (684bp) protein (228aa)
Hydrolase, haloacid dehalogenase-like family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S225_SALRD
HAD superfamily hydrolase
Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:ABC44189.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
sw_10_scaffold_165_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5813..8590
DNA (2778bp) protein (926aa)
DNA polymerase I {ECO:0000313|EMBL:CBH24757.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH24757.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
DNA polymerase I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q2_SALRM
polA; DNA polymerase I
sw_10_scaffold_165_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8689..10005
DNA (1317bp) protein (439aa)
Zinc protease n=2 Tax=Salinibacter ruber RepID=D5H9Q0_SALRM
protease
Protease, putative {ECO:0000313|EMBL:ABC45445.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_10_scaffold_165_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10019..11443
DNA (1425bp) protein (475aa)
Putative zinc protease {ECO:0000313|EMBL:CBH24754.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24754.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Putative zinc protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P9_SALRM
zinc protease
sw_10_scaffold_165_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11424..12089)
DNA (666bp) protein (222aa)
PspC domain family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S229_SALRD
PspC domain-containing protein
PspC domain family {ECO:0000313|EMBL:ABC45415.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_10_scaffold_165_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12141..12776)
DNA (636bp) protein (212aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1};; TaxID=761659 species="Bact
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P7_SALRM
5-formyltetrahydrofolate cyclo-ligase
sw_10_scaffold_165_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13171..14556
DNA (1386bp) protein (462aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S231_SALRD
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
sw_10_scaffold_165_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


14627..15280
DNA (654bp) protein (218aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=24659588 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBH24750.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_10_scaffold_165_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15311..15904
DNA (594bp) protein (198aa)
Ribosome maturation factor RimM n=2 Tax=Salinibacter ruber RepID=RIMM_SALRD
rimM; 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
sw_10_scaffold_165_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15975..16691
DNA (717bp) protein (239aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P3_SALRM
trmD; tRNA (guanine-N(1)-)-methyltransferase
sw_10_scaffold_165_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


16767..17123
DNA (357bp) protein (119aa)
rplS; 50S ribosomal protein L19
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=24659585 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_10_scaffold_165_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17190..18008
DNA (819bp) protein (273aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_10_scaffold_165_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18021..18485
DNA (465bp) protein (155aa)
smpB; SsrA-binding protein
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=24659583 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_10_scaffold_165_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19161..19742
DNA (582bp) protein (194aa)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
Tyrosine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYY_SALRD
tyrS; tyrosyl-tRNA synthetase
sw_10_scaffold_165_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19784..21859)
DNA (2076bp) protein (692aa)
Lysyl endopeptidase [Precursor] {ECO:0000313|EMBL:CBH24743.1}; EC=3.4.21.50 {ECO:0000313|EMBL:CBH24743.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Lysyl endopeptidase [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N8_SALRM
prpL; Lysyl endopeptidase
sw_10_scaffold_165_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21895..22404)
DNA (510bp) protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S240_SALRD
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
sw_10_scaffold_165_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22632..23723)
DNA (1092bp) protein (364aa)
Phosphoribosylaminoimidazole carboxylase ATPase-subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N6_SALRM
purK; phosphoribosylaminoimidazole carboxylase ATPase-subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
Displaying 19 items

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