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sw_10_scaffold_351

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_351_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(180..815)
DNA (636bp) protein (212aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor id=24656815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor, putative {ECO:0000313|EMBL:ABC45273.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_10_scaffold_351_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1453..2427
DNA (975bp) protein (325aa)
hypothetical protein
hypothetical protein id=24657053 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44768.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_351_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2474..3409)
DNA (936bp) protein (312aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CBH23711.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBH23711.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
UDP-glucose 4-epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Q6_SALRM
UDP-glucose 4-epimerase
sw_10_scaffold_351_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3632..4543
DNA (912bp) protein (304aa)
SCO1/SenC family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4H2_SALRM
SCO1/SenC family protein
SCO1/SenC family protein {ECO:0000313|EMBL:CBH22927.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_10_scaffold_351_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4556..4858)
DNA (303bp) protein (101aa)
Retinol dehydrogenase 11 {ECO:0000313|EMBL:ABC43728.1}; EC=1.1.1.- {ECO:0000313|EMBL:ABC43728.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
Retinol dehydrogenase 11 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6L7_SALRD
short-chain dehydrogenase
sw_10_scaffold_351_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4855..5421)
DNA (567bp) protein (189aa)
short-chain dehydrogenase
short-chain dehydrogenase id=24656817 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Short-chain dehydrogenase/reductase (SDR) family protein {ECO:0000313|EMBL:CBH22928.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
sw_10_scaffold_351_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5497..6189)
DNA (693bp) protein (231aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBH22929.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes O
Ribulose-phosphate 3-epimerase n=2 Tax=Salinibacter ruber RepID=D5H4H4_SALRM
rpe; Ribulose-phosphate-3-epimerase
sw_10_scaffold_351_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6460..6738
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H4H5_SALRM
hypothetical protein
Uncharacterized BCR, COG1937 family {ECO:0000313|EMBL:ABC44670.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_10_scaffold_351_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7121..7747
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4H6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22931.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_351_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7835..8899)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4H7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22932.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_351_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9421..9768
DNA (348bp) protein (116aa)
yajC; Preprotein translocase subunit YajC
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=24656822 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Preprotein translocase subunit YajC {ECO:0000313|EMBL:CBH22933.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_10_scaffold_351_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9835..11076
DNA (1242bp) protein (414aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II {ECO:0000313|EMBL:ABC43759.1}; EC=3.5.4.25 {ECO:0000313|EMBL:ABC43759.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroide
Riboflavin biosynthesis protein ribA n=2 Tax=Salinibacter ruber RepID=D5H4H9_SALRM
ribA; riboflavin biosynthesis protein ribA
sw_10_scaffold_351_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11335..12060)
DNA (726bp) protein (242aa)
phoU; phosphate uptake regulator
phoU; phosphate uptake regulator; K02039 phosphate transport system protein id=24658241 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_10_scaffold_351_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12109..13002)
DNA (894bp) protein (298aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702, ECO:0000313|EMBL:CBH25443.1};; ABC phosphate transporter {ECO:0000256|HAMAP-R
Phosphate import ATP-binding protein pstB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBN8_SALRM
pstB; phosphate import ATP-binding protein pstB
sw_10_scaffold_351_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13047..13934)
DNA (888bp) protein (296aa)
Phosphate transport system permease protein pstA n=2 Tax=Salinibacter ruber RepID=D5HBN7_SALRM
pstA; phosphate transport system permease protein pstA
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ABC45651.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
sw_10_scaffold_351_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14035..15000)
DNA (966bp) protein (322aa)
pstC; phosphate ABC transporter permease
pstC; phosphate ABC transporter permease; K02037 phosphate transport system permease protein id=24658238 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC-type phosphate transport system, permease component {ECO:0000313|EMBL:CBH25441.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_10_scaffold_351_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15057..15623)
DNA (567bp) protein (189aa)
ABC-type phosphate transport system, periplasmic component n=2 Tax=Salinibacter ruber RepID=D5HBN5_SALRM
pstS; phosphate ABC transporter substrate-binding protein
ABC-type phosphate transport system, periplasmic component {ECO:0000313|EMBL:CBH25440.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_10_scaffold_351_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16206..16880)
DNA (675bp) protein (225aa)
drrA; response regulator DrrA
Response regulator DrrA {ECO:0000313|EMBL:ABC43949.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
drrA; response regulator DrrA; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=24658236 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_10_scaffold_351_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17219..17449
DNA (231bp) protein (77aa)
MATE efflux family protein n=2 Tax=Salinibacter ruber RepID=D5HBN3_SALRM
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:CBH25438.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_10_scaffold_351_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17449..18366
DNA (918bp) protein (306aa)
matE; MATE efflux family protein
matE; MATE efflux family protein id=24658235 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
MATE efflux family protein {ECO:0000313|EMBL:CBH25438.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_10_scaffold_351_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18464..19360)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBN2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25437.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_351_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19555..21801)
DNA (2247bp) protein (749aa)
Putative helicase {ECO:0000313|EMBL:CBH25436.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
mcrA; helicase
mcrA; helicase id=24658233 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_10_scaffold_351_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21933..23882)
DNA (1950bp) protein (650aa)
TonB-dependent receptor domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ04_SALRD
TonB-dependent receptor domain-containing protein
TonB-dependent receptor domain protein {ECO:0000313|EMBL:ABC44263.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_10_scaffold_351_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24191..25873)
DNA (1683bp) protein (561aa)
Ribonucleoside-diphosphate reductase large chain {ECO:0000313|EMBL:CBH23075.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23075.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Ribonucleoside-diphosphate reductase large chain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4X0_SALRM
nrdA; ribonucleoside-diphosphate reductase large chain
sw_10_scaffold_351_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25945..26919)
DNA (975bp) protein (325aa)
Ribonucleoside-diphosphate reductase beta subunit {ECO:0000313|EMBL:CBH23074.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23074.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4W9_SALRM
nrdB; ribonucleoside-diphosphate reductase subunit beta
sw_10_scaffold_351_26
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27526..29031)
DNA (1506bp) protein (502aa)
Putative halogenase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAA0_9PLAN
Putative halogenase {ECO:0000313|EMBL:EDL58379.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
tryptophan halogenase
sw_10_scaffold_351_27
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29104..30075)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZ48_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL62343.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Predicted Fe-S oxidoreductase
sw_10_scaffold_351_28
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30203..30397)
DNA (195bp) protein (65aa)
asparagine synthase (glutamine-hydrolyzing); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=GWA2_Bacteroidetes_40_15_curated
Putative uncharacterized protein id=3859240 bin=GWC2_Bacteroidetes_40_22 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
asparagine synthase
Displaying 28 items

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