ggKbase home page

sw_10_scaffold_380

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_380_1
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..1218)
DNA (1218bp) protein (406aa)
TRAP-type C4-dicarboxylate transport system, large permease component n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ACK7_9EURY
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:GAD52508.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" s
TRAP dicarboxylate transporter subunit DctM
sw_10_scaffold_380_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1357..2232)
DNA (876bp) protein (292aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8F1_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH24306.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_10_scaffold_380_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2296..3492)
DNA (1197bp) protein (399aa)
pgk_tpi; Bifunctional PGK/TIM; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=24659143 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=761659 species="Bacteria;
pgk_tpi; Bifunctional PGK/TIM
sw_10_scaffold_380_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3583..4599)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Glyceraldehyde-3-phosphate dehydrogenase, type I n=2 Tax=Salinibacter ruber RepID=Q2S3A6_SALRD
gap; glyceraldehyde-3-phosphate dehydrogenase, type I
sw_10_scaffold_380_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4938..5651
DNA (714bp) protein (238aa)
hypothetical protein id=24659145 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC43637.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_10_scaffold_380_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5921..7300
DNA (1380bp) protein (460aa)
C4-dicarboxylate transport transcriptional regulatory protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3A4_SALRD
dctD; C4-dicarboxylate transport transcriptional regulatory protein
C4-dicarboxylate transport transcriptional regulatory protein {ECO:0000313|EMBL:ABC44250.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
sw_10_scaffold_380_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7444..8190
DNA (747bp) protein (249aa)
lipoprotein-releasing system ATP-binding protein lolD; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] id=24659147 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000255|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01708};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Ord
lipoprotein-releasing system ATP-binding protein lolD
sw_10_scaffold_380_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8469..9110
DNA (642bp) protein (214aa)
ATP-dependent protease {ECO:0000313|EMBL:CBH24313.1}; EC=3.4.21.53 {ECO:0000313|EMBL:CBH24313.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
ATP-dependent protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8F8_SALRM
lon; ATP-dependent protease
sw_10_scaffold_380_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9337..10194
DNA (858bp) protein (286aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3A1_SALRD
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CBH24314.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_10_scaffold_380_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10269..10517
DNA (249bp) protein (83aa)
signal transducing histidine kinase
signal transducing histidine kinase id=24659150 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Signal transducing histidine kinase {ECO:0000313|EMBL:CBH24315.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_10_scaffold_380_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10874..12034
DNA (1161bp) protein (387aa)
hypothetical protein
hypothetical protein id=24659151 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24316.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_380_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12282..12986
DNA (705bp) protein (235aa)
HTH-type transcriptional regulator ttgR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8G2_SALRM
ttgR; TtgR family transcriptional regulator
HTH-type transcriptional regulator ttgR {ECO:0000313|EMBL:CBH24317.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_10_scaffold_380_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13051..13509
DNA (459bp) protein (153aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CBH24318.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBH24318.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Long-chain-fatty-acid--CoA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8G3_SALRM
fadD; long-chain-fatty-acid--CoA ligase
Displaying 13 items

View Taxonomy