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sw_10_scaffold_418

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_418_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..412
DNA (411bp) protein (137aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446, ECO:0000313|EMBL:CBH25110.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes
Isocitrate dehydrogenase [NADP] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAQ5_SALRM
icd; isocitrate dehydrogenase
sw_10_scaffold_418_2
unknown

Not on your lists

615..995
DNA (381bp) protein (127aa)

This feature has no annotations

sw_10_scaffold_418_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1141..1911
DNA (771bp) protein (257aa)
NUDIX family hydrolase
NUDIX family hydrolase id=24657902 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hydrolase, NUDIX family protein {ECO:0000313|EMBL:ABC43664.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_10_scaffold_418_4
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2206..2826)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00037E9938
Uncharacterized protein {ECO:0000313|EMBL:KIF74222.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
hypothetical protein
sw_10_scaffold_418_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4084..6156
DNA (2073bp) protein (691aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7J3_SALRM
ligA; NAD-dependent DNA ligase
sw_10_scaffold_418_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6546..6830
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein id=24657566 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44753.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_418_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6864..7376
DNA (513bp) protein (171aa)
GAF domain-containing protein
GAF domain-containing protein; K07170 GAF domain-containing protein id=24657565 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GAF domain protein {ECO:0000313|EMBL:ABC45163.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_10_scaffold_418_8
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7484..7723
DNA (240bp) protein (80aa)
RNA polymerase sigma factor SigW {ECO:0000313|EMBL:EZP79151.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily id=1891284 bin=GWE2_Bacteroidetes_42_39 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
sw_10_scaffold_418_9
unknown

Not on your lists

7720..7908
DNA (189bp) protein (63aa)

This feature has no annotations

sw_10_scaffold_418_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7928..9067
DNA (1140bp) protein (380aa)
Extracellular solute-binding protein, family 7 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7H9_SALRM
extracellular solute-binding protein
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:CBH23984.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
sw_10_scaffold_418_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9293..9562
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00031D5567
protein of unknown function DUF433 Tax=RBG_16_Betaproteobacteria_64_18_curated
protein of unknown function DUF433
sw_10_scaffold_418_12
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

9559..9891
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3D500
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC84462.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
sw_10_scaffold_418_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10022..10978
DNA (957bp) protein (319aa)
Predicted transcriptional regulator n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7H5_SALRM
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBH23980.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_10_scaffold_418_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10995..11870
DNA (876bp) protein (292aa)
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7H4_SALRM
alpha/beta hydrolase
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:CBH23979.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
sw_10_scaffold_418_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11961..12410)
DNA (450bp) protein (150aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
signal transduction histidine kinase, membrane
sensory transduction histidine kinase id=24657749 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_10_scaffold_418_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13067..15043
DNA (1977bp) protein (659aa)
Vitamin B12 transporter btuB [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7H1_SALRM
btuB; vitamin B12 transporter btuB
Vitamin B12 transporter btuB [Precursor] {ECO:0000313|EMBL:CBH23976.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_10_scaffold_418_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15062..16213
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGI3_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49546.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_10_scaffold_418_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16275..17195
DNA (921bp) protein (307aa)
Uncharacterized proteins, LmbE homolog n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7G6_SALRM
LmbE-like protein
Uncharacterized proteins, LmbE homolog {ECO:0000313|EMBL:CBH23971.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_10_scaffold_418_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17302..18381
DNA (1080bp) protein (360aa)
signal transduction histidine kinase, membrane; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] id=24657741 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
signal transduction histidine kinase, membrane
sw_10_scaffold_418_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18608..19024
DNA (417bp) protein (139aa)
Chaperonin, 10 kDa n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S485_SALRD
groS; chaperonin, 10 kDa
Chaperonin, 10 kDa {ECO:0000313|EMBL:ABC43606.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_10_scaffold_418_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19046..20878)
DNA (1833bp) protein (611aa)
hypothetical protein
hypothetical protein id=24657737 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative membrane protein {ECO:0000313|EMBL:ABC45600.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_10_scaffold_418_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20972..21730)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7G0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23965.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_418_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21759..22625)
DNA (867bp) protein (289aa)
hypothetical protein id=24657735 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23964.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_418_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22739..23536)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7F8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23963.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_418_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23649..25145)
DNA (1497bp) protein (499aa)
gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=24659757 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rul
gltX; glutamyl-tRNA synthetase
sw_10_scaffold_418_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25503..27269
DNA (1767bp) protein (589aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
PPIC-type PPIASE domain protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA75_SALRM
PPIC-type PPIASE domain-containing protein
sw_10_scaffold_418_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27759..28637
DNA (879bp) protein (293aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA76_SALRM
hypothetical protein
sw_10_scaffold_418_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28692..30089
DNA (1398bp) protein (466aa)
ppiD; peptidyl-prolyl cis-trans isomerase surA; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] id=24659760 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
ppiD; peptidyl-prolyl cis-trans isomerase surA
sw_10_scaffold_418_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30306..31301
DNA (996bp) protein (332aa)
MoxR-like transcriptional regulator protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA78_SALRM
moxR; moxR-like transcriptional regulator protein
MoxR-like transcriptional regulator protein {ECO:0000313|EMBL:CBH24933.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
sw_10_scaffold_418_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31481..32248
DNA (768bp) protein (256aa)
nqrF; Na(+)-translocating NADH-quinone reductase subunit F; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] id=24659762 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
nqrF; Na(+)-translocating NADH-quinone reductase subunit F
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000313|EMBL:CBH24934.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
Displaying items 1-30 of 37 in total

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