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sw_10_scaffold_556

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_556_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(3..608)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003642300
hypothetical protein
Uncharacterized protein conserved in cyanobacteria {ECO:0000313|EMBL:AEP13391.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidob
sw_10_scaffold_556_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(627..1058)
DNA (432bp) protein (144aa)
hypothetical protein
hypothetical protein id=24657250 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44835.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_556_3
unknown

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comp(1055..1435)
DNA (381bp) protein (127aa)

This feature has no annotations

sw_10_scaffold_556_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1480..2841)
DNA (1362bp) protein (454aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit {ECO:0000313|EMBL:CBH23395.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBH23395.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5U0_SALRM
nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
sw_10_scaffold_556_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2945..3622)
DNA (678bp) protein (226aa)
nuoE; NADH dehydrogenase (ubiquinone), 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] id=24657248 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH dehydrogenase (Ubiquinone), 24 kDa subunit {ECO:0000313|EMBL:CBH23394.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBH23394.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
NADH-ubiquinone oxidoreductase 24 kDa subunit
sw_10_scaffold_556_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3703..5052)
DNA (1350bp) protein (450aa)
nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] id=24657247 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa
sw_10_scaffold_556_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5110..5823)
DNA (714bp) protein (238aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; EC=1.6.99.5 {ECO:0000313|EMBL:CBH23392.1};; NADH dehydrogenase I subunit C {ECO
NADH-quinone oxidoreductase subunit C n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5T7_SALRM
nuoC; NADH-quinone oxidoreductase subunit C/D
sw_10_scaffold_556_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5904..6548)
DNA (645bp) protein (215aa)
nuoB; NADH-quinone oxidoreductase subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] id=24657245 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit B; EC=1.6.5.11;; NADH dehydrogenase I subunit B; NDH-1 subunit B; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
nuoB; NADH-quinone oxidoreductase subunit B
sw_10_scaffold_556_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6746..7120)
DNA (375bp) protein (125aa)
NADH-ubiquinone oxidoreductase; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] id=24657244 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-ubiquinone oxidoreductase
sw_10_scaffold_556_10

Not on your lists

7263..7979
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN05545.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sll1715; hypothetical protein
sw_10_scaffold_556_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7964..8458)
DNA (495bp) protein (165aa)
hypothetical protein
hypothetical protein id=24657239 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23385.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_556_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8455..10320)
DNA (1866bp) protein (622aa)
Glycoside hydrolase {ECO:0000313|EMBL:CBH23384.1}; EC=3.2.1.- {ECO:0000313|EMBL:CBH23384.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Glycoside hydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5S9_SALRM
glycoside hydrolase
sw_10_scaffold_556_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10420..11217)
DNA (798bp) protein (266aa)
Endonuclease-exonuclease-phosphatase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNA1_9EURY
endonuclease/exonuclease/phosphatase
Endonuclease-exonuclease-phosphatase protein {ECO:0000313|EMBL:ERJ07804.1}; Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:CCQ33394.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacte
sw_10_scaffold_556_14
unknown

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11432..11845
DNA (414bp) protein (138aa)

This feature has no annotations

Displaying 14 items

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