ggKbase home page

sw_10_scaffold_593

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_593_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..684)
DNA (684bp) protein (228aa)
GH3 auxin-responsive promoter superfamily {ECO:0000313|EMBL:CBH25084.1}; EC=6.3.2.- {ECO:0000313|EMBL:CBH25084.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
GH3 auxin-responsive promoter superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM9_SALRM
GH3; GH3 auxin-responsive promoter superfamily
sw_10_scaffold_593_2
unknown

Not on your lists

794..1453
DNA (660bp) protein (220aa)

This feature has no annotations

sw_10_scaffold_593_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1472..2398
DNA (927bp) protein (309aa)
folP; dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15] id=24657875 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CBH25083.1}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CBH2508
folP; dihydropteroate synthase
sw_10_scaffold_593_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2666..3466
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25082.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_593_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3490..4188
DNA (699bp) protein (233aa)
pcm; protein-L-isoaspartate (D-aspartate) O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=24657873 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000255|HAMAP-Rule:M
pcm; protein-L-isoaspartate (D-aspartate) O-methyltransferase
sw_10_scaffold_593_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4464..6167
DNA (1704bp) protein (568aa)
ctpA; carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=24657871 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Carboxyl-terminal protease {ECO:0000313|EMBL:CBH25079.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CBH25079.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
ctpA; carboxyl-terminal protease
sw_10_scaffold_593_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6447..9359)
DNA (2913bp) protein (971aa)
Glycolate oxidase subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM3_SALRM
glcD; glycolate oxidase subunit
Glycolate oxidase subunit {ECO:0000313|EMBL:CBH25078.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_10_scaffold_593_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9516..10871)
DNA (1356bp) protein (452aa)
Ysh1p: subunit of polyadenylation factor I
Ysh1p: subunit of polyadenylation factor I id=24657869 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ysh1p: subunit of polyadenylation factor I, putative {ECO:0000313|EMBL:ABC46323.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
sw_10_scaffold_593_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11130..11861)
DNA (732bp) protein (244aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494, ECO:0000313|EMBL:CBH25076.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Probable transaldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM1_SALRM
tal; transaldolase
sw_10_scaffold_593_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11988..13277
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25075.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_593_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13608..14246)
DNA (639bp) protein (213aa)
hypothetical protein id=24657866 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25074.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_593_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14243..14773)
DNA (531bp) protein (177aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Putative phosphoesterase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL8_SALRM
phosphoesterase
sw_10_scaffold_593_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14952..15632)
DNA (681bp) protein (227aa)
UPF0173 metal-dependent hydrolase SRM_02151 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL7_SALRM
metal-dependent hydrolase
UPF0173 metal-dependent hydrolase SRM_02151 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" s
sw_10_scaffold_593_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15763..17478)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25071.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_593_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17693..18145
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25070.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_10_scaffold_593_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18427..19002)
DNA (576bp) protein (192aa)
rpoE; RNA polymerase sigma factor
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24657860 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25069.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_10_scaffold_593_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19222..20229
DNA (1008bp) protein (336aa)
L-aminopeptidase/D-esterase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL3_SALRM
L-aminopeptidase/D-esterase
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:CBH25068.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_10_scaffold_593_18
unknown

Not on your lists

20360..20452
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 18 items

View Taxonomy