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sw_10_scaffold_116_8

Organism: SW_10_Salinibacter_ruber_64_18

partial RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(6011..6520)

Top 3 Functional Annotations

Value Algorithm Source
rfaY; RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 169.0
  • Bit_score: 290
  • Evalue 3.80e-76
rfaY; RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658472 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 170.0
  • Bit_score: 290
  • Evalue 1.40e-75
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABC46204.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 169.0
  • Bit_score: 290
  • Evalue 1.90e-75

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 510
ATGCCTGATCGGGACGACGAGTTCATACAGCTGGTGCGCGAGAACGACGCTCGCCTCCGCAAAATCTGCCGTGTCTACGCAGACAGTGCGGCGGCGCAGCGCGACCTGTACCAGGACATCCTCGTGGAAGTCTGGCGCTCGTTTCCCTCCTTCGAGGGCGACGCCACCCCCAGCACCTGGCTCTATCGCGTGGCGCTCAACACAGCCTTGAGTCACGATCGCACGCAGGCGGTGCGGGAGGAGGCGACGCTCGACACAGACCATCCGGTGTGGACGGACGGCGTGCCCCGCCCCAGCGAGCAGCTCGACAAGCAAGACAAACTCGACCGGCTGTATGACGCCATCGACCGGCTCAACGAGGTCGACAAGGCGCTCGTCATGATGTACCTCGACGAGAAGAGCTACCGGGAGATGGCCGACGTGCTCGGCATCAGCGAAAACTACGTGGGCGTGAAGCTGCATCGGATCAAGAACAAACTGGCCTCCTGGCTGGAGGAAACGCCGGCATGA
PROTEIN sequence
Length: 170
MPDRDDEFIQLVRENDARLRKICRVYADSAAAQRDLYQDILVEVWRSFPSFEGDATPSTWLYRVALNTALSHDRTQAVREEATLDTDHPVWTDGVPRPSEQLDKQDKLDRLYDAIDRLNEVDKALVMMYLDEKSYREMADVLGISENYVGVKLHRIKNKLASWLEETPA*