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sw_10_scaffold_1005

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1005_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..894
DNA (894bp) protein (298aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ERH09736.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ERH09736.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
Ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PH32_9EURY
sw_10_scaffold_1005_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(896..2029)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27426.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_1005_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2101..2325)
DNA (225bp) protein (75aa)
tRNA/rRNA pseudouridine synthase complex protein Gar1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSD5_NATM8
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1
tRNA/rRNA pseudouridine synthase complex protein Gar1 {ECO:0000313|EMBL:CCQ37237.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sour
sw_10_scaffold_1005_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2322..2600)
DNA (279bp) protein (93aa)
Signal recognition particle 19 kDa protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SRP19_NATPD
srp19; signal recognition particle 19K protein
Signal recognition particle 19 kDa protein {ECO:0000255|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000255|HAMAP-Rule:MF_00305};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
sw_10_scaffold_1005_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2662..2994
DNA (333bp) protein (111aa)
hypothetical protein id=24648994 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10129.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_1005_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3094..3903)
DNA (810bp) protein (270aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE92_9EURY
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
sw_10_scaffold_1005_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3968..4798)
DNA (831bp) protein (277aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKU6_HALJP
sw_10_scaffold_1005_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4795..5745)
DNA (951bp) protein (317aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJ87_HALJP
sw_10_scaffold_1005_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5781..5933)
DNA (153bp) protein (51aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Tryptophan synthase beta chain n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGH0_HALAR
tryptophan synthase subunit beta
sw_10_scaffold_1005_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5930..6697)
DNA (768bp) protein (256aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=1227455 species="Archaea; E
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFU3_9EURY
sw_10_scaffold_1005_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6745..7479)
DNA (735bp) protein (245aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIX9_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERH10064.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
methyltransferase type 11
sw_10_scaffold_1005_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7610..8437)
DNA (828bp) protein (276aa)
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YDU1_9EURY
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:GAD51851.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
spermidine/putrescine abc transporter permease protein
sw_10_scaffold_1005_13
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8439..9341)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U256_9EURY
Spermidine Putrescine ABC transporter permease component PotB {ECO:0000313|EMBL:GAD51850.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
potH; prutescine ABC transporter permease protein PotH
sw_10_scaffold_1005_14
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9394..10614)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0ST43_9EURY
Putrescine ABC transporter, periplasmic putrescine-binding protein {ECO:0000313|EMBL:GAD51847.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" sour
livJ6; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
sw_10_scaffold_1005_15
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10936..12018
DNA (1083bp) protein (361aa)
spermidine/putrescine ABC transporter ATPase (EC:3.6.3.31)
Putrescine transport ATP-binding protein PotA n=2 Tax=Halarchaeum acidiphilum RepID=U2YDT8_9EURY
Putrescine transport ATP-binding protein PotA {ECO:0000313|EMBL:GAD51846.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidi
sw_10_scaffold_1005_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12105..12218
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6M8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53496.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying 16 items

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