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sw_10_scaffold_1055

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1055_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..136
DNA (135bp) protein (45aa)
CobW domain-containing protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DCL9_9EURY
CobW domain-containing protein {ECO:0000313|EMBL:ELZ33231.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichens
CobW domain protein
sw_10_scaffold_1055_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(274..408)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRD7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36780.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_10_scaffold_1055_3
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

629..2143
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036F8723
Zinc ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDE59397.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halost
znuA; ABC-type transport system periplasmic substrate-binding protein (probable substrate zinc)
sw_10_scaffold_1055_4
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2140..2361
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036D28AB
Uncharacterized protein {ECO:0000313|EMBL:KDE59396.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_10_scaffold_1055_5
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2358..3131
DNA (774bp) protein (258aa)
ABC transporter ATP-binding protein n=1 Tax=Halomicrobium katesii RepID=UPI00036F6096
Zinc ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA69242.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum koc
znuC; ABC-type transport system ATP-binding protein (probable substrate zinc)
sw_10_scaffold_1055_6
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3134..4189
DNA (1056bp) protein (352aa)
ABC transporter permease n=1 Tax=Halomicrobium katesii RepID=UPI00037C6AF1
ABC transporter permease {ECO:0000313|EMBL:KDE59394.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
znuB; ABC-type transport system permease protein (probable substrate zinc)
sw_10_scaffold_1055_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4186..5478
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003642113
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36776.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_10_scaffold_1055_8
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5514..5666)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EQF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ49132.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_10_scaffold_1055_9
unknown

Not on your lists

comp(5730..5882)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_10_scaffold_1055_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6653..7402
DNA (750bp) protein (250aa)
CAAX amino terminal protease family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NS64_HALBP
caax amino terminal protease
CAAX amino terminal protease family {ECO:0000313|EMBL:ADQ65749.1}; Caax amino terminal protease {ECO:0000313|EMBL:ELY26753.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
sw_10_scaffold_1055_11
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7598..7855
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R6D3_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG20011.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_10_scaffold_1055_12
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7892..8509)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I527_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ91052.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
hypothetical protein
sw_10_scaffold_1055_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8564..9412
DNA (849bp) protein (283aa)
Transcription regulator n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JXP4_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA12754.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
pspA1; transcription regulator
sw_10_scaffold_1055_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9434..11221
DNA (1788bp) protein (596aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=797114 species="Archaea; Eury
Threonine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLR9_9EURY
threonyl-tRNA synthetase
sw_10_scaffold_1055_15
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11543..12277)
DNA (735bp) protein (245aa)
hypothetical protein id=24655429 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88900.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_10_scaffold_1055_16
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12363..13022
DNA (660bp) protein (220aa)
AraC family regulatory protein n=5 Tax=Burkholderia pseudomallei RepID=Q3JG82_BURP1
AraC family transcriptional regulator
AraC family regulatory protein {ECO:0000313|EMBL:ABA52489.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;"
sw_10_scaffold_1055_17
unknown

Not on your lists

comp(13285..13548)
DNA (264bp) protein (88aa)

This feature has no annotations

sw_10_scaffold_1055_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13699..14991)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP31_9EURY
transducer protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ24403.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_10_scaffold_1055_19
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15589..15924
DNA (336bp) protein (112aa)
Probable GTP-binding protein EngB n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ70_9EURY
engB; GTP-binding protein EngB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
sw_10_scaffold_1055_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16130..16423)
DNA (294bp) protein (98aa)
Protein translation factor SUI1 homolog n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ73_HALMD
translation initiation factor Sui1
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_10_scaffold_1055_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16525..18816)
DNA (2292bp) protein (764aa)
Transglutaminase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D640_9EURY
Transglutaminase domain protein {ECO:0000313|EMBL:ELZ29609.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
transglutaminase
sw_10_scaffold_1055_22
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18813..19112)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CIU6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23215.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_10_scaffold_1055_23
unknown

Not on your lists

19145..19906
DNA (762bp) protein (254aa)

This feature has no annotations

sw_10_scaffold_1055_24
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19713..20690)
DNA (978bp) protein (326aa)
Methanol dehydrogenase regulatory protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KVD1_9EURY
ATPase
ATPase {ECO:0000313|EMBL:AJF25447.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_10_scaffold_1055_25
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21237..22361
DNA (1125bp) protein (375aa)
Glycosyltransferase-like protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQC4_9EURY
glycosyltransferase-like protein rbh
Glycosyltransferase-like protein {ECO:0000313|EMBL:ERJ06119.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiama
sw_10_scaffold_1055_26
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22638..23138)
DNA (501bp) protein (167aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Halobacterium sp. DL1 RepID=G4IFV3_9EURY
Enoyl-CoA hydratase {ECO:0000313|EMBL:AHG03523.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
enoyl-CoA hydratase/isomerase
sw_10_scaffold_1055_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23664..24809
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CUY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27020.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
Displaying 27 items

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