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sw_10_scaffold_1057

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1057_trna_2
unknown

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comp(80..216)
DNA (137bp)
transferRNA
sw_10_scaffold_1057_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(280..468)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT98_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10820.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_10_scaffold_1057_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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584..1396
DNA (813bp) protein (271aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W070_9EURY
sw_10_scaffold_1057_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1524..2360
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037F47BD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48075.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_1057_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2407..2691)
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit L n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4Q2_HALMD
RNA polymerase dimerisation
sw_10_scaffold_1057_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2807..3061
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKC4_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA32894.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_10_scaffold_1057_trna_1
unknown

Not on your lists

3126..3196
DNA (71bp)
transferRNA
sw_10_scaffold_1057_6
unknown

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comp(3300..3803)
DNA (504bp) protein (168aa)

This feature has no annotations

sw_10_scaffold_1057_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4056..4337
DNA (282bp) protein (94aa)
rpl44e; 50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=24649688 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl44e; 50S ribosomal protein L44e
sw_10_scaffold_1057_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4340..4513
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPB9_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
30S ribosomal protein S27e
sw_10_scaffold_1057_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4510..5373
DNA (864bp) protein (288aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IWG7_HALVA
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=662477 species="Arch
translation initiation factor IF-2
sw_10_scaffold_1057_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5571..6323
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA20937.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
3-isopropylmalate dehydratase
Displaying 12 items

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