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sw_10_scaffold_1660

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1660_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..468
DNA (468bp) protein (156aa)
NADH-ubiquinone oxidoreductase chain I (EC:1.6.5.3)
NADH dehydrogenase-oxidoreductase-like protein {ECO:0000313|EMBL:ERJ07135.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ERJ07135.1};; NADH-ubiquinone oxidoreductase chain I {ECO:0000313|EMBL:CCQ32757.1}; EC=1.6.5.
NADH dehydrogenase-oxidoreductase-like protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP70_9EURY
sw_10_scaffold_1660_2
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(598..813)
DNA (216bp) protein (72aa)
Putative transcriptional regulator n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GRA3_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ELZ74750.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JC
hypothetical protein
sw_10_scaffold_1660_3
Leptospira kirschneri, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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911..1705
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000366F065
DNA methylase domain protein {ECO:0000313|EMBL:EKO16396.1}; TaxID=1049966 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kirschneri str. H1.;"
ParB domain-containing protein nuclease
sw_10_scaffold_1660_4
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1702..2352)
DNA (651bp) protein (217aa)
NruI n=1 Tax=Rhodococcus rhodochrous RepID=D6QZ77_RHORH
NruI {ECO:0000313|EMBL:ADG60154.1}; TaxID=1829 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous.;"
sw_10_scaffold_1660_5
unknown

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comp(2552..2788)
DNA (237bp) protein (79aa)

This feature has no annotations

sw_10_scaffold_1660_6
unknown

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comp(2825..2950)
DNA (126bp) protein (42aa)

This feature has no annotations

sw_10_scaffold_1660_7
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3031..3231
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W5B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY38747.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_10_scaffold_1660_8
unknown

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3344..3451
DNA (108bp) protein (36aa)

This feature has no annotations

sw_10_scaffold_1660_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3523..4833
DNA (1311bp) protein (437aa)
IS1341-type transposase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQN3_NATPD
IS1341-type transposase
IS1341-type transposase ISNph26 {ECO:0000313|EMBL:CAI49562.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_10_scaffold_1660_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4902..5309)
DNA (408bp) protein (136aa)
hypothetical protein id=24647323 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08470.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_1660_11
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5432..5818)
DNA (387bp) protein (129aa)
Thioesterase superfamily protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X6G2_9EURY
Thioesterase superfamily protein {ECO:0000313|EMBL:ELY57300.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amyloly
thioesterase superfamily protein
sw_10_scaffold_1660_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6413..6916
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MG32_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88149.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_10_scaffold_1660_13
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7005..8024
DNA (1020bp) protein (340aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EJI2_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ELZ46564.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
ABC transporter
sw_10_scaffold_1660_14
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8027..9466
DNA (1440bp) protein (480aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EFP8_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ELZ46565.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
dipeptide/oligopeptide/nickel ABC transporter permease
sw_10_scaffold_1660_15
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9536..10906
DNA (1371bp) protein (457aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24); K02031 peptide/nickel transport system ATP-binding protein id=24653749 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein {ECO:0000313|EMBL:ERG88137.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" so
oligopeptide/dipeptide ABC transporter, ATP-binding protein
sw_10_scaffold_1660_16
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10903..12219
DNA (1317bp) protein (439aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI62_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:ELZ46567.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
ykfD; oligopeptide ABC transporter ATP-binding protein
sw_10_scaffold_1660_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12527..13783
DNA (1257bp) protein (419aa)
S-adenosyl-L-homocysteine hydrolase {ECO:0000313|EMBL:EMA43602.1}; EC=3.3.1.1 {ECO:0000313|EMBL:EMA43602.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
adenosylhomocysteinase (EC:3.3.1.1)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SHL0_9EURY
sw_10_scaffold_1660_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13875..14759)
DNA (885bp) protein (295aa)
pepC; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LC16_HALJP
Phosphoenolpyruvate carboxylase {ECO:0000313|EMBL:EMA29490.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
Displaying 18 items

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