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sw_10_scaffold_1540

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1540_1
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..578)
DNA (576bp) protein (192aa)
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=U3GLG1_NATP1
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
Uncharacterized protein {ECO:0000313|EMBL:KDE57729.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_10_scaffold_1540_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(751..2535)
DNA (1785bp) protein (595aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=halophilic archaeon J07HX5 RepID=U1MWN1_9EURY
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
FKBP-type peptidylprolyl isomerase
sw_10_scaffold_1540_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2609..5008
DNA (2400bp) protein (800aa)
archaeal S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00136}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00136};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00136};; Methionine adenosyltransferase
S-adenosylmethionine synthase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIM4_9EURY
sw_10_scaffold_1540_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5061..5606
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HU24_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27319.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_10_scaffold_1540_5
unknown

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comp(5830..6573)
DNA (744bp) protein (248aa)

This feature has no annotations

sw_10_scaffold_1540_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7023..8945
DNA (1923bp) protein (641aa)
oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=24645604 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative membrane protein required for N-linked glycosylation {ECO:0000313|EMBL:ERH09825.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
oligosaccharyl transferase STT3 subunit
sw_10_scaffold_1540_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8948..9937
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50081.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
conserved hypothetical membrane protein (DUF369)
sw_10_scaffold_1540_8
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9979..10554
DNA (576bp) protein (192aa)
SAM-dependent methlyltransferase n=1 Tax=Halarchaeum acidiphilum RepID=UPI00037C207C
24-sterol C-methyltransferase {ECO:0000313|EMBL:GAD52570.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.
type 11 methyltransferase
sw_10_scaffold_1540_9

Not on your lists

comp(10611..10931)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YFP5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11936.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_10_scaffold_1540_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11044..12603)
DNA (1560bp) protein (520aa)
chaperonin Cpn60/TCP-1 id=24647732 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Thermosome subunit {ECO:0000313|EMBL:ERH08864.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
chaperonin Cpn60/TCP-1
sw_10_scaffold_1540_11
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12766..13572
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0K6Z2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46703.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_10_scaffold_1540_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13859..15568)
DNA (1710bp) protein (570aa)
MCP domain-containing signal transducer n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JXV1_9EURY
htr; MCP domain-containing signal transducer
MCP domain-containing signal transducer {ECO:0000313|EMBL:EMA13811.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula s
sw_10_scaffold_1540_13
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16014..17222)
DNA (1209bp) protein (403aa)
metB; cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGL4_HALAR
Cystathionine gamma-synthase {ECO:0000313|EMBL:EMA19993.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinens
sw_10_scaffold_1540_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17781..18161
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036DF463
Uncharacterized protein {ECO:0000313|EMBL:ELZ27734.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_1540_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18222..18518)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JP00_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10872.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_10_scaffold_1540_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18844..19026
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA52418.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_1540_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19019..19693
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6G9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29759.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_1540_trna_1
unknown

Not on your lists

19759..19832
DNA (74bp)
transferRNA
Displaying 18 items

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