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sw_10_scaffold_231

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_231_1
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA72066.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
sw_10_scaffold_231_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(174..449)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PKZ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG90065.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_10_scaffold_231_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

690..953
DNA (264bp) protein (88aa)
AbrB family transcription regulator n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EN7_HALWD
transcription regulator
AbrB/VapB family protein {ECO:0000313|EMBL:CAJ53584.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strai
sw_10_scaffold_231_4
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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950..1363
DNA (414bp) protein (138aa)
putative toxin-antitoxin system toxin component, PIN family id=24624665 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:ERH00009.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;"
putative toxin-antitoxin system toxin component, PIN family
sw_10_scaffold_231_5
unknown

Not on your lists

comp(1286..1462)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_10_scaffold_231_trna_1
unknown

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comp(1915..1989)
DNA (75bp)
transferRNA
sw_10_scaffold_231_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2078..2716)
DNA (639bp) protein (213aa)
beta-lactamase domain-containing protein id=24646942 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Zn-dependent hydrolase {ECO:0000313|EMBL:ERH11106.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
beta-lactamase domain protein
sw_10_scaffold_231_7
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2926..3507
DNA (582bp) protein (194aa)
HoxA-like transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KTR9_HALAR
DNA-binding protein
HoxA-like transcriptional regulator {ECO:0000313|EMBL:EMA24323.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula arge
sw_10_scaffold_231_8
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3491..4171
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=V5TNH2_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27487.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_10_scaffold_231_9
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4245..4706
DNA (462bp) protein (154aa)
Type 12 methyltransferase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BJG0_9EURY
Type 12 methyltransferase {ECO:0000313|EMBL:ELZ11006.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
type 12 methyltransferase
sw_10_scaffold_231_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4866..5276
DNA (411bp) protein (137aa)
transcriptional regulator, ArsR family id=24654298 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Putative transcriptional regulator {ECO:0000313|EMBL:ERG88576.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;
transcriptional regulator
sw_10_scaffold_231_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5484..6731
DNA (1248bp) protein (416aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYX3_HALVA
sw_10_scaffold_231_12
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6808..7491
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0STM0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB62844.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_10_scaffold_231_13
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7721..8020
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DP13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK37979.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_10_scaffold_231_14
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8168..9358)
DNA (1191bp) protein (397aa)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IZ22_HALVA
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA01976.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
ABC transporter
sw_10_scaffold_231_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9609..10703
DNA (1095bp) protein (365aa)
cheB; protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000255|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000255|HAMAP-Rule:MF_00099};; TaxID=348780 species="Archaea; Euryarchaeota; Halobact
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=CHEB_NATPD
sw_10_scaffold_231_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11318..12379)
DNA (1062bp) protein (354aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
Methyltransferase n=2 Tax=Haloarcula hispanica RepID=V5TH96_HALHI
putative methyltransferase
sw_10_scaffold_231_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12483..13028
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NS37_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10644.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_10_scaffold_231_18
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13056..15887
DNA (2832bp) protein (944aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrine
tRNA-splicing ligase RtcB n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JL38_NATP1
hypothetical protein
sw_10_scaffold_231_19
unknown

Not on your lists

comp(15938..16456)
DNA (519bp) protein (173aa)

This feature has no annotations

sw_10_scaffold_231_20

Not on your lists

16954..18642
DNA (1689bp) protein (563aa)
5'-nucleotidase (EC:3.1.3.5)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y9G9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07702.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Displaying 21 items

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