ggKbase home page

sw_10_scaffold_247

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_247_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(140..892)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IV74_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA00616.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_10_scaffold_247_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1092..1640
DNA (549bp) protein (183aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1227453 species="Archaea; Euryarchae
DNA topoisomerase 1 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K7F5_9EURY
sw_10_scaffold_247_3
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1997..5185
DNA (3189bp) protein (1063aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1227494 species="Archaea; Euryarchae
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZVI9_9EURY
sw_10_scaffold_247_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5420..5887
DNA (468bp) protein (156aa)
Transposase ISHwa16_A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCX3_9EURY
Transposase ISHwa16_A {ECO:0000313|EMBL:EMA54939.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
ISSod10-type transposase ISHwa16
sw_10_scaffold_247_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6120..7160
DNA (1041bp) protein (347aa)
Oxidoreductase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JT51_HALVA
Oxidoreductase {ECO:0000313|EMBL:EMA11528.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
tas; oxidoreductase
sw_10_scaffold_247_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7200..9143)
DNA (1944bp) protein (648aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWG3_HALBP
Chromosome segregation protein (Spc25, Csm1, Pcs1)
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:ADQ69383.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
sw_10_scaffold_247_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9266..9877)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIM9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG02950.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_10_scaffold_247_8
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9930..11378)
DNA (1449bp) protein (483aa)
Xylulose kinase (EC:2.7.1.17)
Xylulose kinase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JGH5_9EURY
Autoinducer 2 kinase LsrK {ECO:0000313|EMBL:CQR48672.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_10_scaffold_247_9
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11599..12360)
DNA (762bp) protein (254aa)
ArcR family transcription regulator n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G028_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ65651.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
arcR3; ArcR family transcription regulator
sw_10_scaffold_247_10
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12704..13696)
DNA (993bp) protein (331aa)
Transketolase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CKV6_9EURY
Transketolase {ECO:0000313|EMBL:ELZ23920.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
transketolase
sw_10_scaffold_247_11
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13693..14703)
DNA (1011bp) protein (337aa)
Dehydrogenase E1 component n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WU64_9EURY
Dehydrogenase E1 component {ECO:0000313|EMBL:ELY52751.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM
dehydrogenase E1 component
sw_10_scaffold_247_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14768..15352)
DNA (585bp) protein (195aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAC5_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA54841.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
dihydrolipoyllysine acetyltransferase
sw_10_scaffold_247_13
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15573..16286)
DNA (714bp) protein (238aa)
E3 binding domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQ69_HALTV
E3 binding domain protein
E3 binding domain protein {ECO:0000313|EMBL:ADB60328.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (str
sw_10_scaffold_247_14
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16442..17830
DNA (1389bp) protein (463aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
Dihydrolipoyl dehydrogenase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HE88_9EURY
sw_10_scaffold_247_15
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

18394..19374
DNA (981bp) protein (327aa)
Carbohydrate kinase, FGGY n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J2J2_DEIGD
xylB; xylulokinase
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:ABF44292.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis
sw_10_scaffold_247_16
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19434..20726
DNA (1293bp) protein (431aa)
SAF domain protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RKW5_HALHG
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ADQ15706.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Ha
sw_10_scaffold_247_17
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20791..22233
DNA (1443bp) protein (481aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Citreicella sp. SE45 RepID=D0D8D1_9RHOB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL36040.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846
extracellular solute-binding protein
sw_10_scaffold_247_18
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

Not on your lists

22237..23163
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=uncultured Chloroflexi bacterium RepID=H5SID2_9CHLR
ABC transporter permease
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:BAL55918.1}; TaxID=166587 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi
sw_10_scaffold_247_19
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

23153..24058
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI000371250E
binding-protein-dependent transport systems inner membrane component
Tax=BJP_IG2158_Anaerolineales_38_74
sw_10_scaffold_247_20
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24121..25506
DNA (1386bp) protein (462aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KIR2_HALAR
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA20049.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
sugar ABC transporter ATP-binding protein
sw_10_scaffold_247_21
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25622..26650
DNA (1029bp) protein (343aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JEP2_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase 2 {ECO:0000313|EMBL:CQR52052.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
4-hydroxythreonine-4-phosphate dehydrogenase
sw_10_scaffold_247_22
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26733..27494)
DNA (762bp) protein (254aa)
ArcR family transcription regulator n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NPW0_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:EMA33487.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
transcriptional regulator
sw_10_scaffold_247_23
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27691..28869)
DNA (1179bp) protein (393aa)
Unsaturated glucuronyl hydrolase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W980_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01946.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_247_24
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28877..29728)
DNA (852bp) protein (284aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MC80_ARTPP
nitrate/sulfonate/bicarbonate ABC transporter system periplasmic protein
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ADX75131.1}; Flags: Precursor;; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococ
sw_10_scaffold_247_25
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30059..30817
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000365D6C7
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ50058.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Meth
nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein
sw_10_scaffold_247_26
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30814..31623
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003747429
nitrate ABC transporter permease
Nitrate ABC transporter permease {ECO:0000313|EMBL:AIB15861.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiril
sw_10_scaffold_247_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31562..32407
DNA (846bp) protein (282aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=4 Tax=Arthrobacter RepID=I3W1A5_9MICC
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC transporter related
sw_10_scaffold_247_28
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


33085..33231
DNA (147bp) protein (49aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KFJ5_HALAR
Aspartyl-tRNA ligase {ECO:0000313|EMBL:EMA18954.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 1
Displaying 28 items

View Taxonomy