ggKbase home page

sw_10_scaffold_265

Search features with annotation key words

Displaying items 1-30 of 45 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_265_1
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..237)
DNA (237bp) protein (79aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KIE7_HALAR
S-adenosyl-L-homocysteine hydrolase
sw_10_scaffold_265_2
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

406..1641
DNA (1236bp) protein (412aa)
Uncharacterized protein (Fragment) n=1 Tax=halophilic archaeon J07HB67 RepID=U1PQC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH12631.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_10_scaffold_265_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1638..1841
DNA (204bp) protein (68aa)
Lysophospholipase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLW8_9EURY
Lysophospholipase {ECO:0000313|EMBL:ERH11134.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_265_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1872..2786)
DNA (915bp) protein (305aa)
hypothetical protein id=24650059 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH11137.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_265_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2908..3549
DNA (642bp) protein (214aa)
hypothetical protein id=24646972 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative integral membrane protein {ECO:0000313|EMBL:ERH11136.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_265_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3705..5006)
DNA (1302bp) protein (434aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZ66_9EURY
amidohydrolase
sw_10_scaffold_265_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5529..6026
DNA (498bp) protein (166aa)
Putative nucleotidyltransferase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NK88_9EURY
Putative nucleotidyltransferase {ECO:0000313|EMBL:ERG97363.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsby
hypothetical protein
sw_10_scaffold_265_8
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6019..6528
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DYD0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40385.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_10_scaffold_265_9
unknown

Not on your lists

comp(6612..6749)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_10_scaffold_265_10

Not on your lists

comp(7050..8219)
DNA (1170bp) protein (390aa)
Putative metal-dependent membrane protease n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWQ8_9ARCH
Putative metal-dependent membrane protease {ECO:0000313|EMBL:ESS03007.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_10_scaffold_265_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8322..9167
DNA (846bp) protein (282aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000313|EMBL:ELZ30983.1}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D830_9EURY
sw_10_scaffold_265_12
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9214..10278
DNA (1065bp) protein (355aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostag
DNA methylase N-4/N-6 domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9V4_HALXS
modification methylase
sw_10_scaffold_265_13
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10312..10743)
DNA (432bp) protein (144aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BG94_9EURY
sw_10_scaffold_265_14
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10743..11015)
DNA (273bp) protein (91aa)
Transcription regulator n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BI40_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ09324.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
transcription regulator
sw_10_scaffold_265_15
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11130..12077)
DNA (948bp) protein (316aa)
serA2; phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I6K1_9EURY
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ELZ91039.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis AT
sw_10_scaffold_265_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12082..12642)
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PDU1_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box binding family protein
sw_10_scaffold_265_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12815..13834
DNA (1020bp) protein (340aa)
RNA methylase; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] id=24644288 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
N2-methylguanosine tRNA methyltransferase {ECO:0000313|EMBL:ERH08522.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
RNA methylase
sw_10_scaffold_265_18
unknown

Not on your lists

13893..14153
DNA (261bp) protein (87aa)

This feature has no annotations

sw_10_scaffold_265_19
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14601..15179)
DNA (579bp) protein (193aa)
UPF0218 protein C443_12281 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLJ4_HALAR
UPF0218 protein C443_12281 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
hypothetical protein
sw_10_scaffold_265_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15182..15379)
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
sw_10_scaffold_265_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15379..15957)
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZV1_HALMD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV46859.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
sw_10_scaffold_265_22
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15975..16355)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3C1_9EURY
SSU processome protein Utp24 {ECO:0000313|EMBL:EMA34826.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
nucleotide binding protein PINc
sw_10_scaffold_265_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16352..17581)
DNA (1230bp) protein (410aa)
Translation initiation factor 2 subunit gamma n=1 Tax=halophilic archaeon J07HX64 RepID=U1QWY0_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1085028 species="Arc
translation initiation factor 2 subunit gamma
sw_10_scaffold_265_24
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17834..19540
DNA (1707bp) protein (569aa)
HTR-like protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GVS8_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ76351.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
HTR-like protein
sw_10_scaffold_265_25
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19723..20139)
DNA (417bp) protein (139aa)
Ribonuclease VapC n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q7R3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG00878.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_265_26
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20136..20405)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP08_9EURY
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERH02584.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
AbrB family transcription regulator
sw_10_scaffold_265_27
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20502..21260
DNA (759bp) protein (253aa)
Creatininase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CHR2_9EURY
Creatininase {ECO:0000313|EMBL:ELZ22835.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
hypothetical protein
sw_10_scaffold_265_28
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21382..22341
DNA (960bp) protein (320aa)
beta-lactamase id=24649679 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Zn-dependent hydrolase {ECO:0000313|EMBL:ERH10766.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
beta-lactamase domain-containing protein
sw_10_scaffold_265_29
unknown

Not on your lists

23049..23144
DNA (96bp) protein (32aa)

This feature has no annotations

sw_10_scaffold_265_30
R_NC10_66_22, NC10, Bacteria

Not on your lists

23254..23835
DNA (582bp) protein (194aa)
NUDIX hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV08_9EURY
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
MutT/NUDIX family protein
Displaying items 1-30 of 45 in total

View Taxonomy