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sw_10_scaffold_299

Search features with annotation key words

Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_299_1
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..174
DNA (174bp) protein (58aa)
50S ribosomal protein L3 n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XX68_9EURY
ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source
sw_10_scaffold_299_2
unknown

Not on your lists

comp(517..810)
DNA (294bp) protein (98aa)

This feature has no annotations

sw_10_scaffold_299_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1306..3303)
DNA (1998bp) protein (666aa)
acs5; acyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=24645282 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
acs2; acyl-coenzyme A synthetase (EC:6.2.1.1)
Acyl-coenzyme A synthetase/AMP-fatty acid ligase {ECO:0000313|EMBL:ERH09499.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_10_scaffold_299_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3508..3786
DNA (279bp) protein (93aa)
GCN5-related N-acetyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0Y3_HALMD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV48998.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
sw_10_scaffold_299_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3852..3986
DNA (135bp) protein (45aa)
Acetyltransferase family n=3 Tax=Haloarcula RepID=Q5V4A6_HALMA
N-acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AEM56910.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC
sw_10_scaffold_299_6
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4039..5724
DNA (1686bp) protein (562aa)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JX61_9EURY
mcmA1; methylmalonyl-CoA mutase subunit alpha
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:EMA13762.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula s
sw_10_scaffold_299_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5721..6140
DNA (420bp) protein (140aa)
Methylmalonyl-CoA epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYV7_9EURY
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:EMA50796.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
methylmalonyl-CoA epimerase
sw_10_scaffold_299_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6144..6422)
DNA (279bp) protein (93aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8M4_HALXS
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:AEH36776.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopige
sw_10_scaffold_299_9
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6845..8206
DNA (1362bp) protein (454aa)
Succinate-semialdehyde dehydrogenase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0H8Y8_9EURY
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ELZ21414.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena lim
succinate-semialdehyde dehydrogenase
sw_10_scaffold_299_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8267..9712
DNA (1446bp) protein (482aa)
Htr-like protein n=2 Tax=Halobacterium salinarum RepID=O51970_HALSA
putative signal-transducing histidine kinase / response regulator
Htr-like protein {ECO:0000313|EMBL:AAG20731.1}; Uncharacterized protein {ECO:0000313|EMBL:AAC82814.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
sw_10_scaffold_299_11
unknown

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9914..11488
DNA (1575bp) protein (525aa)

This feature has no annotations

sw_10_scaffold_299_12
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11496..12008
DNA (513bp) protein (171aa)
Cell surface protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NGR8_9EURY
Cell surface protein {ECO:0000313|EMBL:EMA57006.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
ABC transporter
sw_10_scaffold_299_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12097..13068
DNA (972bp) protein (324aa)
glycosyl transferase family 2 n=1 Tax=Halomicrobium katesii RepID=UPI000374CBCC
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACV49308.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_10_scaffold_299_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13079..14836)
DNA (1758bp) protein (586aa)
DNA mismatch repair protein MutS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNF8_9EURY
DNA mismatch repair protein MutS {ECO:0000313|EMBL:ELZ24158.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
mutS3; DNA mismatch repair protein
sw_10_scaffold_299_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14919..15407
DNA (489bp) protein (163aa)
Ig domain-containing protein group 1 domain-containing protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHU8_9EURY
hypothetical protein
Ig domain-containing protein group 1 domain-containing protein {ECO:0000313|EMBL:ERJ06942.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ32357.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halo
sw_10_scaffold_299_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15474..15941
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20599.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_299_17
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15993..17264
DNA (1272bp) protein (424aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=2 Tax=Haloarcula hispanica RepID=G0HWU0_HALHT
histidinol dehydrogenase
sw_10_scaffold_299_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17351..18043
DNA (693bp) protein (231aa)
radB; DNA repair and recombination protein RadB id=24647500 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
radB; DNA repair and recombination protein RadB
sw_10_scaffold_299_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18073..18747)
DNA (675bp) protein (225aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIW8_9EURY
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
phosphate uptake regulator PhoU
sw_10_scaffold_299_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18828..19523)
DNA (696bp) protein (232aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_02131}; Short=HPPK {ECO:0000256|HAMAP-Rule:MF_02131};; EC=2.7.6.3 {ECO:0000256|HAMAP-Rule:MF_02131};; 2-amino-4-hydroxy-6
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003816DBC
hypothetical protein
sw_10_scaffold_299_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19596..20774)
DNA (1179bp) protein (393aa)
dihydropteroate synthase (EC:2.5.1.15)
dchpS; dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15] id=24645114 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Dihydropteroate synthase {ECO:0000313|EMBL:ERH09335.1}; EC=2.5.1.15 {ECO:0000313|EMBL:ERH09335.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
sw_10_scaffold_299_22
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20881..21813
DNA (933bp) protein (311aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
mch; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27)
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K7M9_9EURY
sw_10_scaffold_299_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21810..22313
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKK1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23148.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_299_24
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22318..23949)
DNA (1632bp) protein (544aa)
Protein synthesis factor GTP-binding n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NML8_HALUD
protein synthesis factor GTP-binding
Protein synthesis factor GTP-binding {ECO:0000313|EMBL:ACV11331.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus ut
sw_10_scaffold_299_25
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24134..24385
DNA (252bp) protein (84aa)
Glutaredoxin n=2 Tax=Haloarcula hispanica RepID=G0HW60_HALHT
grx; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AJF26430.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_10_scaffold_299_trna_1
unknown

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24712..24796
DNA (85bp)
transferRNA
sw_10_scaffold_299_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25164..25415
DNA (252bp) protein (84aa)
hypothetical protein; K07574 RNA-binding protein id=24644232 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative RNA-binding protein containing KH domain, possibly ribosomal protein {ECO:0000313|EMBL:ERH08465.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="hal
putative RNA-binding protein containing KH domain, possibly ribosomal protein
sw_10_scaffold_299_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25408..26319
DNA (912bp) protein (304aa)
Mechanosensitive ion channel MscS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CI04_9EURY
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:ELZ22268.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
mechanosensitive ion channel MscS
sw_10_scaffold_299_28
unknown

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comp(26372..26812)
DNA (441bp) protein (147aa)

This feature has no annotations

sw_10_scaffold_299_29
unknown

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comp(26965..27141)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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