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sw_10_scaffold_317

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_317_1
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..1615
DNA (1614bp) protein (538aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CDN0_9EURY
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ELZ20748.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" sourc
carbamoyl phosphate synthase
sw_10_scaffold_317_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1710..3278
DNA (1569bp) protein (523aa)
accB_1; acyl-CoA carboxylase 1, carboxyltransferase component (beta subunit) (EC:6.4.1.-)
Propionyl-CoA carboxylase carboxyltransferase component {ECO:0000313|EMBL:CAI50216.2}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI50216.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Propionyl-CoA carboxylase carboxyltransferase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INT6_NATPD
sw_10_scaffold_317_3

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3421..3882
DNA (462bp) protein (154aa)
Putative transcriptional regulator n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJA1_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:ESS02355.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
transcription regulator
sw_10_scaffold_317_4

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comp(3917..4771)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X4A3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02354.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_10_scaffold_317_5

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comp(4909..6063)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XQR1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS02356.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_10_scaffold_317_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6567..7913
DNA (1347bp) protein (449aa)
LemA domain-containing protein id=24649637 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10727.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_317_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7945..8766)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J455_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15447.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_10_scaffold_317_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8842..10089)
DNA (1248bp) protein (416aa)
Cysteine desulfurase, SufS subfamily n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMU1_HALUD
cysteine desulfurase, SufS subfamily
Cysteine desulfurase, SufS subfamily {ECO:0000313|EMBL:ACV11404.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus ut
sw_10_scaffold_317_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10198..10497)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89770.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_10_scaffold_317_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10499..11254)
DNA (756bp) protein (252aa)
TPR repeat-containing protein id=24647550 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH08687.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
TPR repeat-containing protein
sw_10_scaffold_317_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11308..11865
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227488 species="A
2'-5' RNA ligase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CIP7_9EURY
2'-5' RNA ligase
sw_10_scaffold_317_12

Not on your lists

12108..12260
DNA (153bp) protein (51aa)
Ribosomal protein L39e n=1 Tax=uncultured organism RepID=M1P2K2_9ZZZZ
Ribosomal protein L39e {ECO:0000313|EMBL:AGF93646.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
rpl39R; 50S ribosomal protein L39.eR
sw_10_scaffold_317_13
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12257..12535
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AG12_NATGS
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium greg
sw_10_scaffold_317_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12538..13206
DNA (669bp) protein (223aa)
translation initiation factor eIF-6; K03264 translation initiation factor 6 id=24644470 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
translation initiation factor IF-6
sw_10_scaffold_317_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13364..14326
DNA (963bp) protein (321aa)
phytoene synthase (EC:2.5.1.32); K02291 phytoene synthase [EC:2.5.1.32] id=24647557 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Phytoene synthase {ECO:0000313|EMBL:ERH08693.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ERH08693.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
phytoene/squalene synthetase
sw_10_scaffold_317_16
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14348..15247)
DNA (900bp) protein (300aa)
Carotene biosynthesis associated membrane protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P867_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:ERG89752.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
carotenoid biosynthesis protein
sw_10_scaffold_317_17
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15240..16124)
DNA (885bp) protein (295aa)
lye; lycopene elongase (EC:2.5.1.-) id=24654806 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
lye; lycopene elongase (EC:2.5.1.-)
UbiA prenyltransferase {ECO:0000313|EMBL:ERG89751.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_10_scaffold_317_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16422..17339
DNA (918bp) protein (306aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT73_9EURY
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:ELZ25597.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
etfB2; electron transfer flavoprotein subunit beta
sw_10_scaffold_317_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17342..18970
DNA (1629bp) protein (543aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZF2_HALMD
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACV48720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
sw_10_scaffold_317_20
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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19169..20047
DNA (879bp) protein (293aa)
Flavoprotein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W843_9EURY
flavoprotein
Flavoprotein {ECO:0000313|EMBL:AGN01478.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
Displaying 20 items

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