ggKbase home page

sw_10_scaffold_458

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_458_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

599..2551
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J935_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16304.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_10_scaffold_458_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2596..3420
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VFI9_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY35103.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_10_scaffold_458_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3544..4989
DNA (1446bp) protein (482aa)
Amino acid-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZX0_9EURY
Amino acid-binding protein {ECO:0000313|EMBL:ELZ28760.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
ABC transporter substrate-binding protein
sw_10_scaffold_458_4
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4993..6024
DNA (1032bp) protein (344aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HYC3_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ88707.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofe
branched-chain amino acid ABC transporter permease
sw_10_scaffold_458_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6021..7253
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SHP3_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ28758.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
livM1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_10_scaffold_458_6
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7250..8146
DNA (897bp) protein (299aa)
ABC transporter n=2 Tax=Haloferax RepID=M0HVR7_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ88705.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-897.;"
livG2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_10_scaffold_458_7
Haloferax sp. D1227, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8143..8850
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYR2_9EURY
Putative ABC transporter {ECO:0000313|EMBL:AAQ62857.1}; TaxID=78509 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. D1227.;"
livF-9; branched-chain amino acid ABC transporter ATP-binding protein
sw_10_scaffold_458_8

Not on your lists

comp(8916..10028)
DNA (1113bp) protein (371aa)
Malate/L-lactate dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWJ3_9ARCH
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS07320.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_10_scaffold_458_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10169..10423)
DNA (255bp) protein (85aa)
Carotenoid oxygenase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LRB7_9EURY
Carotenoid oxygenase {ECO:0000313|EMBL:EMA34590.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
Carotenoid oxygenase
sw_10_scaffold_458_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10420..11520)
DNA (1101bp) protein (367aa)
probable beta-carotene 15,15'-monooxygenase (EC:1.14.99.36)
Probable beta-carotene 15,15'-monooxygenase {ECO:0000313|EMBL:CCQ35761.1}; EC=1.14.99.36 {ECO:0000313|EMBL:CCQ35761.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Probable beta-carotene 15,15'-monooxygenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZZ7_NATM8
sw_10_scaffold_458_11
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11703..14285)
DNA (2583bp) protein (861aa)
Patched family protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1A8_HALTV
hypothetical protein
Patched family protein {ECO:0000313|EMBL:ADB63155.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain
sw_10_scaffold_458_12
unknown

Not on your lists

comp(14967..15224)
DNA (258bp) protein (86aa)

This feature has no annotations

sw_10_scaffold_458_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15569..15991
DNA (423bp) protein (141aa)
Putative PD1-like DNA-binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZC6_9EURY
Putative PD1-like DNA-binding protein {ECO:0000313|EMBL:ERH09620.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
polA operon protein ( DNA-binding protein)
sw_10_scaffold_458_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15993..19073
DNA (3081bp) protein (1027aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=795797 species="Archaea; Euryar
DNA polymerase II large subunit n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4F0_HALJB
DNA polymerase D polymerase subunit DP2
Displaying 14 items

View Taxonomy