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sw_10_scaffold_542

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_542_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..218)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J976_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA04290.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_10_scaffold_542_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

435..794
DNA (360bp) protein (120aa)
Twin arginine-targeting protein translocase, TatA/E family {ECO:0000313|EMBL:KCZ70457.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenac
sw_10_scaffold_542_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(941..1831)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWM6_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48236.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_542_4
unknown

Not on your lists

1952..2626
DNA (675bp) protein (225aa)

This feature has no annotations

sw_10_scaffold_542_5
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2656..2916
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R6Q3_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG20126.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_10_scaffold_542_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3230..5407
DNA (2178bp) protein (726aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1333523 species="Archaea;
metG; methionyl-tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VXA8_9EURY
sw_10_scaffold_542_7
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

5515..6462
DNA (948bp) protein (316aa)
# 458957 # 459805 # -1 # ;gc_cont=0.372 id=18313488 bin=Nanosalina tax=Nanosalina
Putative homoserine kinase type II {ECO:0000313|EMBL:EGQ43284.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_10_scaffold_542_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6479..7051)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QU75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10833.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_542_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7110..7511)
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JCQ1_HALJB
PilT protein domain protein
sw_10_scaffold_542_10

Not on your lists

comp(7495..7716)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZS04_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05515.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_10_scaffold_542_11
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7766..8140)
DNA (375bp) protein (125aa)
Glutamate dehydrogenase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LN57_HALLT
Amino acid dehydrogenase {ECO:0000313|EMBL:KKF39860.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
Glu/Leu/Phe/Val dehydrogenase
sw_10_scaffold_542_12
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8118..9194)
DNA (1077bp) protein (359aa)
ABC transporter n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XCZ2_9EURY
ABC transporter {ECO:0000313|EMBL:ELY59487.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;
spermidine/putrescine ABC transporter ATPase
sw_10_scaffold_542_13
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9199..9429)
DNA (231bp) protein (77aa)
ABC transporter n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFP0_9EURY
NifC-like ABC-type transporterporter
NifC-like ABC-type porter {ECO:0000313|EMBL:AFZ73560.1}; Flags: Precursor;; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natrono
sw_10_scaffold_542_14
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9864..10808)
DNA (945bp) protein (315aa)
Molybdate ABC transporter periplasmic protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZX2_9EURY
Molybdate ABC transporter periplasmic protein {ECO:0000313|EMBL:ELZ16551.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterr
ABC-type molybdate transport system, periplasmic component
sw_10_scaffold_542_15
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10874..11608
DNA (735bp) protein (245aa)
DNA-binding domain of ModE / Molybdate-binding domain of ModE n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A555_9EURY
DNA-binding domain of ModE / Molybdate-binding domain of ModE {ECO:0000313|EMBL:GAD52774.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
ModE family transcriptional regulator
sw_10_scaffold_542_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11633..12256)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LX88_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38197.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_10_scaffold_542_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12479..12784)
DNA (306bp) protein (102aa)
DNA polymerase sliding clamp n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ78_HALUD
DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=519442 species="Archa
sw_10_scaffold_542_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13294..13701
DNA (408bp) protein (136aa)
Nascent polypeptide-associated complex protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P1U9_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
nac; nascent polypeptide-associated complex protein
sw_10_scaffold_542_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13703..14431
DNA (729bp) protein (243aa)
tRNA (Adenine-N1-)-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHM2_9EURY
L-isoaspartyl protein carboxyl methyltransferase
tRNA (Adenine-N1-)-methyltransferase {ECO:0000313|EMBL:ELZ22731.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
sw_10_scaffold_542_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14446..15063)
DNA (618bp) protein (206aa)
hypothetical protein id=24645511 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09724.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_542_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15070..15390)
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source
DNA-directed RNA polymerase subunit n=1 Tax=halophilic archaeon J07HX64 RepID=U1P146_9EURY
transcription termination factor Tfs
sw_10_scaffold_542_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15552..16562)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLH5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22734.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_542_23
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16914..17210
DNA (297bp) protein (99aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V525_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA22073.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_10_scaffold_542_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17306..18520
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037392FD
Uncharacterized protein {ECO:0000313|EMBL:ELZ22744.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_542_25
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(18510..19364)
DNA (855bp) protein (285aa)
Metal-dependent hydrolase, beta-lactamase superfamily III n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGB2_9EURY
Metal-dependent hydrolase, beta-lactamase superfamily III {ECO:0000313|EMBL:EGQ43333.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina
PhnP-like protein
sw_10_scaffold_542_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19416..19871)
DNA (456bp) protein (152aa)
hypothetical protein id=24646100 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10278.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_542_27
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19970..20290)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A254_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51739.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_10_scaffold_542_28
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20977..21195)
DNA (219bp) protein (73aa)
Transposase ISH6 n=2 Tax=Halobacterium salinarum RepID=B0R4S8_HALS3
transposase (ISH6)
Uncharacterized protein {ECO:0000313|EMBL:AAG19467.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_10_scaffold_542_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21435..21635
DNA (201bp) protein (67aa)
GTP-binding protein HSR1-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1L9_9EURY
GTP-binding protein HSR1-like protein {ECO:0000313|EMBL:ELZ29345.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
GTP-binding protein
Displaying 29 items

View Taxonomy