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sw_10_scaffold_591

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_591_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(62..241)
DNA (180bp) protein (60aa)
RNA polymerase Rpb6; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=24655919 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;"
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
sw_10_scaffold_591_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(244..444)
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6) id=24645660 bin=halophilic_archaeon_J07HX64 species=Salinarchaeum sp. Harcht-Bsk1 genus=Salinarchaeum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
sw_10_scaffold_591_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(449..868)
DNA (420bp) protein (140aa)
30S ribosomal protein S9 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ12_HALMD
rps9p; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
sw_10_scaffold_591_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(862..1317)
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT4_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rpl13p; 50S ribosomal protein L13
sw_10_scaffold_591_trna_2
unknown

Not on your lists

comp(1616..1700)
DNA (85bp)
transferRNA
sw_10_scaffold_591_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1763..2551)
DNA (789bp) protein (263aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ09_HALMD
RNA polymerase insert
sw_10_scaffold_591_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2554..2937)
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps11p; 30S ribosomal protein S11P
sw_10_scaffold_591_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2938..3462)
DNA (525bp) protein (175aa)
30S ribosomal protein S4 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QVJ9_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
rps4p; 30S ribosomal protein S4P
sw_10_scaffold_591_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3449..3985)
DNA (537bp) protein (179aa)
30S ribosomal protein S13 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFE3_9EURY
30S ribosomal protein S18e (S13p)
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
sw_10_scaffold_591_trna_1
unknown

Not on your lists

comp(4005..4087)
DNA (83bp)
transferRNA
sw_10_scaffold_591_9
unknown

Not on your lists

4549..4764
DNA (216bp) protein (72aa)

This feature has no annotations

sw_10_scaffold_591_10
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5225..5503
DNA (279bp) protein (93aa)
Probable alkaline phosphatase D n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNM1_9PLAN
Probable alkaline phosphatase D {ECO:0000313|EMBL:EAQ81916.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopir
alkaline phosphatase
sw_10_scaffold_591_11
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5577..6038
DNA (462bp) protein (154aa)
PhoD2; alkaline phosphatase (EC:3.1.3.1)
Probable alkaline phosphatase D n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNM1_9PLAN
Probable alkaline phosphatase D {ECO:0000313|EMBL:EAQ81916.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopir
sw_10_scaffold_591_12
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6803..7663
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YGS4_NATP1
Uncharacterized protein {ECO:0000313|EMBL:ELY72896.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
hypothetical protein
sw_10_scaffold_591_13
unknown

Not on your lists

comp(7792..8040)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_10_scaffold_591_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8176..8883)
DNA (708bp) protein (236aa)
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
preprotein translocase subunit secd; K03072 preprotein translocase subunit SecD id=24655129 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
secD; protein-export membrane protein SecD
sw_10_scaffold_591_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9469..9693)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH09035.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_10_scaffold_591_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9690..10550)
DNA (861bp) protein (287aa)
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=24647905 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
SecD/SecF/SecDF export membrane protein
sw_10_scaffold_591_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10849..11163
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6X3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28853.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_10_scaffold_591_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11167..12294)
DNA (1128bp) protein (376aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWM5_HALMD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACV48235.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
sw_10_scaffold_591_19
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12444..13370)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H0E2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ77976.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_10_scaffold_591_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13446..14075)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QXI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10637.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
conserved hypothetical protein containing circadian clock protein KaiC/DNA repair protein RadA domain
sw_10_scaffold_591_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14336..15007)
DNA (672bp) protein (224aa)
minD3; cell division inhibitor MinD-like protein; K03609 septum site-determining protein MinD id=24649640 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10728.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
minD2; cell division inhibitor MinD-like
sw_10_scaffold_591_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15115..16029
DNA (915bp) protein (305aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1085028 species="Ar
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKS2_9EURY
sw_10_scaffold_591_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16026..16484
DNA (459bp) protein (153aa)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXI0_HALMD
aspartate carbamoyltransferase regulatory subunit
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
sw_10_scaffold_591_24
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16871..17158
DNA (288bp) protein (96aa)
Diketogulonate related aldo/keto reductase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QNS3_9EURY
Diketogulonate related aldo/keto reductase {ECO:0000313|EMBL:ERH08723.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
aldo/keto reductase family oxidoreductase
sw_10_scaffold_591_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17261..18247
DNA (987bp) protein (329aa)
cation transporter n=1 Tax=Halomicrobium katesii RepID=UPI00038014A9
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACV47628.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
sw_10_scaffold_591_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18293..19549)
DNA (1257bp) protein (419aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY52_9EURY
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ELZ28161.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
MiaB-like tRNA modifying enzyme
sw_10_scaffold_591_27
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19713..20687
DNA (975bp) protein (325aa)
Uncharacterized protein id=24646099 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10277.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_591_28
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20718..21368)
DNA (651bp) protein (217aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=halophilic archaeon J07HX5 RepID=U1MG05_9EURY
Displaying items 1-30 of 42 in total

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