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sw_10_scaffold_606

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_606_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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149..2398
DNA (2250bp) protein (750aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUQ8_HALUD
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV11071.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="H
sw_10_scaffold_606_2
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2548..3306
DNA (759bp) protein (253aa)
Rhodopsin n=3 Tax=Haloarcula RepID=V5TJJ0_HALHI
rhodopsin
Rhodopsin {ECO:0000313|EMBL:AHB64865.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_10_scaffold_606_3
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3384..5186)
DNA (1803bp) protein (601aa)
Bacterio-opsin activator n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BRR0_9EURY
Bacterio-opsin activator {ECO:0000313|EMBL:ELZ13691.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
PAS domain S-box
sw_10_scaffold_606_4
unknown

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comp(5293..5580)
DNA (288bp) protein (96aa)

This feature has no annotations

sw_10_scaffold_606_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5762..6271
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E5R7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERJ07548.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
hypothetical protein
sw_10_scaffold_606_6
unknown

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comp(6207..6833)
DNA (627bp) protein (209aa)

This feature has no annotations

sw_10_scaffold_606_7

Not on your lists

comp(6934..8406)
DNA (1473bp) protein (491aa)
sulfite oxidase (EC:1.8.3.1)
Sulfite oxidase {ECO:0000313|EMBL:AEN04789.1}; EC=1.8.3.1 {ECO:0000313|EMBL:AEN04789.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Sulfite oxidase n=1 Tax=halophilic archaeon DL31 RepID=G2MIK8_9ARCH
sw_10_scaffold_606_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8564..8911
DNA (348bp) protein (116aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LP73_9EURY
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisal
FKBP-type peptidyl-prolyl cis-trans isomerase
sw_10_scaffold_606_9

Not on your lists

9246..10199
DNA (954bp) protein (318aa)
sugar kinase (EC:2.7.1.-)
Sugar kinase, ribokinase family n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y948_9ARCH
Sugar kinase, ribokinase family {ECO:0000313|EMBL:ESS11458.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_10_scaffold_606_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10315..10902
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076};; TaxID=797114 species="Archaea;
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Q9_9EURY
sw_10_scaffold_606_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11141..11677)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWL2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA13547.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_10_scaffold_606_12
unknown

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comp(11794..12066)
DNA (273bp) protein (91aa)

This feature has no annotations

sw_10_scaffold_606_13
unknown

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comp(12085..12459)
DNA (375bp) protein (125aa)

This feature has no annotations

sw_10_scaffold_606_14
unknown

Not on your lists

13205..13351
DNA (147bp) protein (49aa)

This feature has no annotations

sw_10_scaffold_606_15
unknown

Not on your lists

13344..13616
DNA (273bp) protein (91aa)

This feature has no annotations

sw_10_scaffold_606_16
unknown

Not on your lists

13650..13775
DNA (126bp) protein (42aa)

This feature has no annotations

sw_10_scaffold_606_17
unknown

Not on your lists

13748..14590
DNA (843bp) protein (281aa)

This feature has no annotations

sw_10_scaffold_606_18
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14646..15890)
DNA (1245bp) protein (415aa)
Integrase family protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBX0_HALXS
integrase protein
Integrase family protein {ECO:0000313|EMBL:AEH35946.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM
sw_10_scaffold_606_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16086..16589
DNA (504bp) protein (168aa)
Amino acid-binding ACT domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D279_9EURY
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ELZ28802.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
hypothetical protein
sw_10_scaffold_606_20
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16635..17906
DNA (1272bp) protein (424aa)
HTR-like protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HAN5_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AKH96801.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" so
PAS domain S-box
sw_10_scaffold_606_21
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17916..18518
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L234_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA26045.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_10_scaffold_606_22
unknown

Not on your lists

18529..18681
DNA (153bp) protein (51aa)

This feature has no annotations

sw_10_scaffold_606_23
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18819..19691)
DNA (873bp) protein (291aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KQ09_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMA23286.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylol
putative hydrolase or acyltransferase of alpha/beta superfamily
sw_10_scaffold_606_24
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19878..20555)
DNA (678bp) protein (226aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000313|EMBL:ELY64390.1}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000313|EMBL:ELY64390.1};; UMP pyrophosphorylase {ECO:
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XRI3_9EURY
sw_10_scaffold_606_25
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20683..21273)
DNA (591bp) protein (197aa)
hypothetical protein; K07585 hypothetical protein id=24655508 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Putative PP-loop ATPase {ECO:0000313|EMBL:ERG88966.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
putative subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
sw_10_scaffold_606_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21273..21614)
DNA (342bp) protein (114aa)
probable DNA-binding protein id=24649704 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-binding protein J07HX64_02569 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
Displaying 26 items

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