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sw_10_scaffold_879

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_879_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..373)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPY2_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10429.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_10_scaffold_879_trna_1
unknown

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comp(842..915)
DNA (74bp)
transferRNA
sw_10_scaffold_879_2
unknown

Not on your lists

comp(985..1695)
DNA (711bp) protein (237aa)

This feature has no annotations

sw_10_scaffold_879_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1853..3709)
DNA (1857bp) protein (619aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DH65_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:ELZ33494.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
glycosyl hydrolase, glucoamylase
sw_10_scaffold_879_4
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3753..4925)
DNA (1173bp) protein (391aa)
Sulfatase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WCE0_9EURY
Sulfatase {ECO:0000313|EMBL:ELY45983.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
sulfatase
sw_10_scaffold_879_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5397..6035
DNA (639bp) protein (213aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=24649389 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
rpl1P; 50S ribosomal protein L1P
sw_10_scaffold_879_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6037..7095
DNA (1059bp) protein (353aa)
50S ribosomal protein L10 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL10_NATPD
rplP0; acidic ribosomal protein P0
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000255|HAMAP-Rule:MF_00280}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_10_scaffold_879_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7104..7445
DNA (342bp) protein (114aa)
50S ribosomal protein L12 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PN44_9EURY
50S ribosomal protein L12P
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
sw_10_scaffold_879_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7577..8809
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNL6_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10244.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_10_scaffold_879_9
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8938..10638)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JM41_HALVA
Uncharacterized protein {ECO:0000313|EMBL:AKH98367.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
sw_10_scaffold_879_10
unknown

Not on your lists

10828..11229
DNA (402bp) protein (134aa)

This feature has no annotations

sw_10_scaffold_879_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11322..11669
DNA (348bp) protein (116aa)
Transcriptional regulator n=4 Tax=Haloarcula RepID=G0HRI0_HALHT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEM58320.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (stra
sw_10_scaffold_879_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11774..12025
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V056_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15035.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_10_scaffold_879_13
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12553..13770
DNA (1218bp) protein (406aa)
Superfamily I DNA and RNA helicase (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZV1_9EURY
Superfamily I DNA and RNA helicase {ECO:0000313|EMBL:ERG89588.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;
uvrD; repair helicase
sw_10_scaffold_879_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13899..14390
DNA (492bp) protein (164aa)
ribE; riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=halophilic archaeon J07HX64 RepID=U1P1L7_9EURY
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ERH10535.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_10_scaffold_879_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14587..15015
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Halococcus RepID=M0MC79_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps12P; 30S ribosomal protein S12
sw_10_scaffold_879_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15018..15623
DNA (606bp) protein (202aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=24644226 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
30S ribosomal protein S7
sw_10_scaffold_879_17

Not on your lists

15747..16331
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4YDD0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09122.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
bioY; dethiobiotin synthesis protein
sw_10_scaffold_879_18
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16343..17056
DNA (714bp) protein (238aa)
abc21a; cobalt ABC transporter ATP-binding protein; K02006 cobalt/nickel transport system ATP-binding protein id=24622579 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:ERH06591.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
abc21a; cobalt ABC transporter ATP-binding protein
sw_10_scaffold_879_19
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17060..17770
DNA (711bp) protein (237aa)
cobalt transporter; K02008 cobalt/nickel transport system permease protein id=24619178 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
ABC-type cobalt transport system, permease component CbiQ related transporter {ECO:0000313|EMBL:ERH06590.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
cobalt transporter
sw_10_scaffold_879_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17784..18533)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22421.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_879_21
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18868..19023
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DSG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39112.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_10_scaffold_879_22
unknown

Not on your lists

19164..19376
DNA (213bp) protein (71aa)

This feature has no annotations

sw_10_scaffold_879_23
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19413..20483)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPD9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA22798.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_10_scaffold_879_24
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20713..20808
DNA (96bp) protein (32aa)
Elongation factor 2 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIB4_9EURY
elongation factor EF-2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Displaying 25 items

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