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sw_10_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 96 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_117_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..381
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D571_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29319.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_117_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(427..726)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44292.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_117_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

826..1146
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44293.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_117_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1177..1581
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49431.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_117_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1697..1918
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44295.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_117_6
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2053..2352
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SL53_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ57360.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
sw_10_scaffold_117_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2378..3346
DNA (969bp) protein (323aa)
arsA2; arsenical pump-driving ATPase (EC:3.6.3.16)
Arsenical pump-driving ATPase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX77_9EURY
Arsenical pump-driving ATPase {ECO:0000313|EMBL:EMA49434.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
sw_10_scaffold_117_8
unknown

Not on your lists

3350..3568
DNA (219bp) protein (73aa)

This feature has no annotations

sw_10_scaffold_117_9
unknown

Not on your lists

3844..3942
DNA (99bp) protein (33aa)

This feature has no annotations

sw_10_scaffold_117_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4203..6113
DNA (1911bp) protein (637aa)
Carbon starvation protein, membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D495_9EURY
Carbon starvation protein, membrane protein {ECO:0000313|EMBL:ELZ30270.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
carbon starvation protein CstA
sw_10_scaffold_117_11
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6325..7050)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7H4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66092.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_10_scaffold_117_12
unknown

Not on your lists

comp(7047..7175)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_10_scaffold_117_13
unknown

Not on your lists

7414..7842
DNA (429bp) protein (143aa)

This feature has no annotations

sw_10_scaffold_117_14
unknown

Not on your lists

8113..8364
DNA (252bp) protein (84aa)

This feature has no annotations

sw_10_scaffold_117_15

Not on your lists

8364..8987
DNA (624bp) protein (208aa)
Na+/proline symporter n=1 Tax=uncultured archaeon A07HR67 RepID=V4XXZ6_9ARCH
Na+/proline symporter {ECO:0000313|EMBL:ESS03462.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
Na+/solute symporter
sw_10_scaffold_117_16
unknown

Not on your lists

comp(9033..9359)
DNA (327bp) protein (109aa)

This feature has no annotations

sw_10_scaffold_117_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9831..10535)
DNA (705bp) protein (235aa)
hypothetical protein; K09967 hypothetical protein id=24616663 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87440.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_10_scaffold_117_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10609..11271)
DNA (663bp) protein (221aa)
Agmatinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1G5_SPHTD
agmatinase
Agmatinase {ECO:0000313|EMBL:ACZ38082.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobac
sw_10_scaffold_117_19
unknown

Not on your lists

comp(11422..11556)
DNA (135bp) protein (45aa)

This feature has no annotations

sw_10_scaffold_117_20
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11689..13164
DNA (1476bp) protein (492aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=795797 species="Archaea; Euryarc
Proline--tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7U6_HALJB
sw_10_scaffold_117_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13407..17969
DNA (4563bp) protein (1521aa)
glutamate synthase (EC:1.4.7.1)
Glutamate synthase, large subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N788_9EURY
Glutamate synthase, large subunit {ECO:0000313|EMBL:EMA53423.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
sw_10_scaffold_117_22
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18117..19094
DNA (978bp) protein (326aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XZN3_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY66043.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeot
nucleoside-diphosphate-sugar epimerase
sw_10_scaffold_117_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19206..20264
DNA (1059bp) protein (353aa)
egsA; glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8K3_9EURY
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMA
sw_10_scaffold_117_24
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20512..21303
DNA (792bp) protein (264aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DSZ6_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ38626.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquich
alpha/beta hydrolase fold protein
sw_10_scaffold_117_25
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21644..23455)
DNA (1812bp) protein (604aa)
Peptidase S9 prolyl oligopeptidase active site domain-containing protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZU64_9EURY
Peptidase S9 prolyl oligopeptidase active site domain-containing protein {ECO:0000313|EMBL:ELY89107.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natria
peptidase S9 prolyl oligopeptidase active site domain-containing protein
sw_10_scaffold_117_26
Lactobacillus pentosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23597..25225
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NGB2_9EURY
Cell surface SD repeat protein {ECO:0000313|EMBL:EIW14347.1}; Flags: Fragment;; TaxID=1136177 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactob
Collagen domain protein
sw_10_scaffold_117_27

Not on your lists

comp(25452..25658)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1B7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06396.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_10_scaffold_117_trna_1
unknown

Not on your lists

26011..26096
DNA (86bp)
transferRNA
sw_10_scaffold_117_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


26174..26647
DNA (474bp) protein (158aa)
30S ribosomal protein S13 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q7_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
rps13p; 30S ribosomal protein S13P
sw_10_scaffold_117_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


26647..27174
DNA (528bp) protein (176aa)
30S ribosomal protein S4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP59_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps4p; 30S ribosomal protein S4P
Displaying items 1-30 of 96 in total

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