ggKbase home page

sw_10_scaffold_147

Search features with annotation key words

Displaying items 1-30 of 40 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_147_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..267)
DNA (267bp) protein (89aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEN5_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
preprotein translocase subunit SecD
sw_10_scaffold_147_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(264..1118)
DNA (855bp) protein (285aa)
Protein-export membrane protein SecF n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MU37_HALMO
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secF; preprotein translocase subunit SecF
sw_10_scaffold_147_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1291..1764)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW94044.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_10_scaffold_147_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1837..2625)
DNA (789bp) protein (263aa)
Dihydropteroate synthase n=1 Tax=Halobacterium sp. DL1 RepID=G4IHP9_9EURY
dihydropteroate synthase
Dihydropteroate synthase {ECO:0000313|EMBL:AHG03232.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_10_scaffold_147_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2654..4351)
DNA (1698bp) protein (566aa)
dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase (EC:2.5.1.15 6.3.2.12 6.3.2.17)
Dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase {ECO:0000313|EMBL:CCQ32497.1}; EC=2.5.1.15 {ECO:0000313|EMBL:CCQ32497.1};; EC=6
Dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH80_9EURY
sw_10_scaffold_147_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4745..6388)
DNA (1644bp) protein (548aa)
purNH; phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.2 2.1.2.3)
Phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000313|EMBL:CAI48922.1}; EC=2.1.2.2 {ECO:0000313|EMBL:CAI48922.1};; EC=2.1.2.3 {ECO:000031
Phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISG5_NATPD
sw_10_scaffold_147_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6634..11688
DNA (5055bp) protein (1685aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS sensor protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D005_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELZ28795.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
sw_10_scaffold_147_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11980..13284
DNA (1305bp) protein (435aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSU6_HALMO
sw_10_scaffold_147_9
unknown

Not on your lists

13224..13379
DNA (156bp) protein (52aa)

This feature has no annotations

sw_10_scaffold_147_10
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13491..14858)
DNA (1368bp) protein (456aa)
Diaminopimelate decarboxylase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B736_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
diaminopimelate decarboxylase
sw_10_scaffold_147_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14855..15709)
DNA (855bp) protein (285aa)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase {ECO:0000313|EMBL:EMA44961.1}; EC=2.3.1.117 {ECO:0000313|EMBL:EMA44961.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9C4_9EURY
sw_10_scaffold_147_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15706..16524)
DNA (819bp) protein (273aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102};; TaxID=1132509 spe
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LPR3_9EURY
dihydrodipicolinate reductase
sw_10_scaffold_147_13
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16521..17474)
DNA (954bp) protein (318aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1495067 specie
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DB18_HALXS
dihydrodipicolinate synthase
sw_10_scaffold_147_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18001..18498
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHZ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44958.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_147_15
unknown

Not on your lists

comp(18518..18673)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_10_scaffold_147_16

Not on your lists

18840..19616
DNA (777bp) protein (259aa)
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y232_9ARCH
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit {ECO:0000313|EMBL:ESS08748.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon
PUA domain containing protein
sw_10_scaffold_147_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19757..20194
DNA (438bp) protein (146aa)
Nascent polypeptide-associated complex protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IY28_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;
nac; nascent polypeptide-associated complex protein
sw_10_scaffold_147_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20191..20991
DNA (801bp) protein (267aa)
Type 12 methyltransferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GSJ6_9EURY
Type 12 methyltransferase {ECO:0000313|EMBL:ESP88066.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
tRNA(1-methyladenosine) methyltransferase-like methyltransferase
sw_10_scaffold_147_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21069..21281
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MQG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49046.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_147_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21393..21794
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49047.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
oligopeptide/dipeptide ABC transporter, ATP-binding protein
sw_10_scaffold_147_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22123..22755)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCU2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42225.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_10_scaffold_147_22
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22851..23351
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZJY7_9EURY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ELY85887.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 1
acetyltransferase
sw_10_scaffold_147_23
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23663..24262)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9P5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01679.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_10_scaffold_147_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24461..25042
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43875.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
BioY protein
sw_10_scaffold_147_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25039..25848
DNA (810bp) protein (270aa)
Putative cobalt ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDQ1_9EURY
Putative cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA43876.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
abc21a; cobalt ABC transporter ATP-binding protein
sw_10_scaffold_147_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25984..26691
DNA (708bp) protein (236aa)
Cobalt transporter n=3 Tax=Halococcus hamelinensis RepID=M0M6S9_9EURY
Cobalt transporter {ECO:0000313|EMBL:EMA41497.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC-type cobalt transport system, permease component CbiQ
sw_10_scaffold_147_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26792..28999
DNA (2208bp) protein (736aa)
Fe-S oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDZ8_9EURY
Fe-S oxidoreductase {ECO:0000313|EMBL:EMA54910.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
Fe-S oxidoreductase
sw_10_scaffold_147_28
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29024..31288)
DNA (2265bp) protein (755aa)
beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AE81_9EURY
Beta-glucosidase {ECO:0000313|EMBL:ELY95643.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
sw_10_scaffold_147_29
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31419..32381
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PTC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA72085.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
putative membrane-associated, metal-dependent hydrolase
sw_10_scaffold_147_30
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32536..33516
DNA (981bp) protein (327aa)
Putative membrane-associated, metal-dependent hydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GV57_9EURY
Putative membrane-associated, metal-dependent hydrolase {ECO:0000313|EMBL:ESP89031.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobo
putative membrane-associated, metal-dependent hydrolase
Displaying items 1-30 of 40 in total

View Taxonomy