ggKbase home page

sw_10_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 41 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_182_1
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..414)
DNA (414bp) protein (138aa)
Stress response protein/ transporter 5 ( substrates cationic amino acids) n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G8S0_9EURY
Stress response protein/ transporter 5 (Substrates cationic amino acids) {ECO:0000313|EMBL:ELZ68590.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
amino acid transporter
sw_10_scaffold_182_2
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(485..952)
DNA (468bp) protein (156aa)
Amino acid permease n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HRC5_9EURY
Amino acid permease {ECO:0000313|EMBL:ELZ85669.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
amino acid permease-associated protein
sw_10_scaffold_182_3
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(967..2079)
DNA (1113bp) protein (371aa)
Stress response protein/ transporter 5 ( substrates cationic amino acids) n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G8S0_9EURY
Stress response protein/ transporter 5 (Substrates cationic amino acids) {ECO:0000313|EMBL:ELZ68590.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
amino acid transporter
sw_10_scaffold_182_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2289..2624)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M732_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41496.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_10_scaffold_182_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2809..3546)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW94150.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_10_scaffold_182_6
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3924..5624
DNA (1701bp) protein (567aa)
Cyclohexanone monooxygenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WN57_9EURY
Cyclohexanone monooxygenase {ECO:0000313|EMBL:ELY50894.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innerm
cyclohexanone monooxygenase
sw_10_scaffold_182_7
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5749..5973
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WII5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFZ88900.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hypothetical protein
sw_10_scaffold_182_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6356..7165)
DNA (810bp) protein (270aa)
hypothetical protein; K07140 id=24628906 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Fe-S protein {ECO:0000313|EMBL:ERG91649.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
MOSC domain protein
sw_10_scaffold_182_9
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7267..8235)
DNA (969bp) protein (323aa)
Alpha/beta hydrolase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WN41_9EURY
Alpha/beta hydrolase {ECO:0000313|EMBL:ELY50895.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolic
alpha/beta hydrolase
sw_10_scaffold_182_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8361..9821)
DNA (1461bp) protein (487aa)
Protein translocase subunit SecY n=2 Tax=Halococcus RepID=M0LTN2_9EURY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=113250
secY; preprotein translocase subunit SecY
sw_10_scaffold_182_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9838..10380)
DNA (543bp) protein (181aa)
50S ribosomal protein L15P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHG9_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
ribosomal protein L15
sw_10_scaffold_182_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10470..10952)
DNA (483bp) protein (161aa)
50S ribosomal protein L30P n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQK3_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L30
sw_10_scaffold_182_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10952..11626)
DNA (675bp) protein (225aa)
30S ribosomal protein S5 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D943_HALXS
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
sw_10_scaffold_182_14
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11623..12213)
DNA (591bp) protein (197aa)
50S ribosomal protein L18P n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1J1_9EURY
50S ribosomal protein L18P/L5E
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" s
sw_10_scaffold_182_15
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12213..12698)
DNA (486bp) protein (162aa)
50S ribosomal protein L19e n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQ71_HALBP
50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bori
sw_10_scaffold_182_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12695..13774)
DNA (1080bp) protein (360aa)
50S ribosomal protein L32e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHG5_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:EMA44134.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
50S ribosomal protein L32e
sw_10_scaffold_182_17
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13764..14378)
DNA (615bp) protein (205aa)
50S ribosomal protein L6P n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W687_9EURY
rpl6p; 50S ribosomal protein L6P
50S ribosomal protein L6P {ECO:0000313|EMBL:AGN02182.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk
sw_10_scaffold_182_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14406..14798)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS8_NATPD
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_10_scaffold_182_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14824..15009)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRP5_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ham
rps14P; 30S ribosomal protein S14P
sw_10_scaffold_182_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15009..15590)
DNA (582bp) protein (194aa)
50S ribosomal protein L5 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HE16_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus H
50S ribosomal protein L5
sw_10_scaffold_182_21
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15587..16402)
DNA (816bp) protein (272aa)
30S ribosomal protein S4e n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZU4_9EURY
30S ribosomal protein S4E
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA111
sw_10_scaffold_182_22
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16399..16797)
DNA (399bp) protein (133aa)
50S ribosomal protein L24P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP64_NATM8
50S ribosomal protein L24P {ECO:0000313|EMBL:AKH98255.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum
rpl24; 50S ribosomal protein L24
sw_10_scaffold_182_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16797..17195)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y033_NATM8
rpl14; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_10_scaffold_182_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17192..17650)
DNA (459bp) protein (153aa)
30S ribosomal protein S17P n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF82_HALMO
30S ribosomal protein S17P {ECO:0000313|EMBL:EMA44402.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1
30S ribosomal protein S11e (S17p)
sw_10_scaffold_182_25
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17641..18042)
DNA (402bp) protein (134aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754, ECO:0000313|EMBL:EMA05013.1}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_
rnp1; ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J9M8_9EURY
sw_10_scaffold_182_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(18039..18278)
DNA (240bp) protein (80aa)
50S ribosomal protein L29P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHF6_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
rpmC; 50S ribosomal protein L29P
sw_10_scaffold_182_27
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(18281..19333)
DNA (1053bp) protein (351aa)
30S ribosomal protein S3 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A628_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;
rps3p; 30S ribosomal protein S3P
sw_10_scaffold_182_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(19333..19830)
DNA (498bp) protein (166aa)
50S ribosomal protein L22P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC8_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L22
sw_10_scaffold_182_29
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(19891..20313)
DNA (423bp) protein (141aa)
30S ribosomal protein S19P n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7M9_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
rps19p; 30S ribosomal protein S19P
sw_10_scaffold_182_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(20313..21029)
DNA (717bp) protein (239aa)
50S ribosomal protein L2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6F7_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rpl2p; 50S ribosomal protein L2P
Displaying items 1-30 of 41 in total

View Taxonomy