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sw_10_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_22_1
unknown

Not on your lists

2..247
DNA (246bp) protein (82aa)

This feature has no annotations

sw_10_scaffold_22_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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538..1461
DNA (924bp) protein (308aa)
RimK domain-containing protein ATP-grasp n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7G6_9EURY
RimK domain-containing protein ATP-grasp {ECO:0000313|EMBL:EMA53887.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
RimK domain-containing protein ATP-grasp
sw_10_scaffold_22_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1613..2008)
DNA (396bp) protein (132aa)
Heat shock protein Hsp20 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTS9_9EURY
Heat shock protein Hsp20 {ECO:0000313|EMBL:EFW92008.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
heat shock protein Hsp20
sw_10_scaffold_22_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2156..3169)
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
gap; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating) (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Halococcus hamelinensis RepID=M0M6Z8_9EURY
sw_10_scaffold_22_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3291..4379
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49920.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_22_6
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4744..6222
DNA (1479bp) protein (493aa)
ATP-grasp protein-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBE3_9EURY
ATP-grasp protein-like protein {ECO:0000313|EMBL:ELY58962.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inn
putative ATP-grasp enzyme
sw_10_scaffold_22_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6233..6889
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWE3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49916.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_22_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6962..7651
DNA (690bp) protein (230aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
pimT1; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTH6_HALMO
sw_10_scaffold_22_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7840..8580
DNA (741bp) protein (247aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUB7_9EURY
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:ELZ26821.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sou
protein-L-isoaspartate O-methyltransferase
sw_10_scaffold_22_trna_1
unknown

Not on your lists

8756..8828
DNA (73bp)
transferRNA
sw_10_scaffold_22_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8854..9279
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QTR2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91991.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
Protein of unknown function (DUF3257)
sw_10_scaffold_22_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9441..9671
DNA (231bp) protein (77aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit H n=1 Tax=Halobacterium sp. DL1 RepID=G4IAE4_9EURY
RNA polymerase Rpb5
sw_10_scaffold_22_12
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9668..11233
DNA (1566bp) protein (522aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:EMA65743.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA65743.1};; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
DNA-directed RNA polymerase subunit B n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7C3_9EURY
DNA-directed RNA polymerase subunit beta''
sw_10_scaffold_22_13
Halococcus sp. 197A, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11339..13165
DNA (1827bp) protein (609aa)
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=24646171 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1197130 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
sw_10_scaffold_22_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13214..16171
DNA (2958bp) protein (986aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit A n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRB9_9EURY
DNA-directed RNA polymerase subunit A'
sw_10_scaffold_22_15
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16164..17402
DNA (1239bp) protein (413aa)
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
DNA-directed RNA polymerase subunit A'' n=2 Tax=Haloarcula hispanica RepID=G0HSR2_HALHT
sw_10_scaffold_22_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17417..17887
DNA (471bp) protein (157aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
NusA family KH domain protein
sw_10_scaffold_22_17
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17982..18410
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Halobacterium salinarum RepID=RS12_HALS3
rps12P; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; HmaS12; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteri
sw_10_scaffold_22_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18414..19028
DNA (615bp) protein (205aa)
30S ribosomal protein S7 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCA1_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
30S ribosomal protein S7P
sw_10_scaffold_22_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19227..19979)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Halococcus hamelinensis RepID=UPI000299E93E
Uncharacterized protein {ECO:0000313|EMBL:EMA43375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_22_20
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20644..22830
DNA (2187bp) protein (729aa)
Elongation factor 2 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CND8_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natria
translation elongation factor aEF-2
sw_10_scaffold_22_21
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23035..23418)
DNA (384bp) protein (128aa)
HTH DNA binding domain family protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZBC8_9EURY
HTH DNA binding domain family protein {ECO:0000313|EMBL:ELY82912.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 1
HTH DNA binding domain family protein
sw_10_scaffold_22_22
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(23457..23651)
DNA (195bp) protein (65aa)
HTH DNA binding domain family protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZBC8_9EURY
HTH DNA binding domain family protein {ECO:0000313|EMBL:ELY82912.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 1
HTH DNA binding domain family protein
sw_10_scaffold_22_23
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23696..24172)
DNA (477bp) protein (159aa)
Putative cyclase n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZA91_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02021.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_22_24
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

24301..24960
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HMQ3_THES4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK72490.1}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (strain CGM
sw_10_scaffold_22_25
unknown

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comp(25057..25335)
DNA (279bp) protein (93aa)

This feature has no annotations

sw_10_scaffold_22_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(25772..26668)
DNA (897bp) protein (299aa)
Sec-independent protein translocase component TatC 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD81_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
tatC; twin-arginine translocation protein TatC
sw_10_scaffold_22_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26968..29370
DNA (2403bp) protein (801aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZE0_NATM8
tatC2; twin arginine translocation system subunit TatC
Sec-independent protein translocase subunit TatC {ECO:0000313|EMBL:CCQ35531.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="N
sw_10_scaffold_22_28
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29559..29813
DNA (255bp) protein (85aa)
Putative CopG/Arc/MetJ family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5Y7_HALJB
putative CopG/Arc/MetJ family transcriptional regulator
Putative CopG/Arc/MetJ family transcriptional regulator {ECO:0000313|EMBL:ELY34161.1}; Putative transcriptional regulator, CopG/Arc/MetJ family protein {ECO:0000313|EMBL:ADJ13793.1}; TaxID=795797 spec
sw_10_scaffold_22_29
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29806..30522
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZGE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59745.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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