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sw_10_scaffold_325

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_325_1
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

567..941
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9ZB23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY82812.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_10_scaffold_325_2
unknown

Not on your lists

comp(985..1200)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_10_scaffold_325_3
unknown

Not on your lists

comp(1362..2096)
DNA (735bp) protein (245aa)

This feature has no annotations

sw_10_scaffold_325_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2155..2640
DNA (486bp) protein (162aa)
Gluconate dehydratase n=1 Tax=Halogranum salarium B-1 RepID=J2ZKQ2_9EURY
Gluconate dehydratase {ECO:0000313|EMBL:EJN61295.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
Mandelate racemase/muconate lactonizing protein
sw_10_scaffold_325_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2698..3084)
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA41539.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_10_scaffold_325_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3179..4135
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYS2_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01992.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_10_scaffold_325_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4863..6632)
DNA (1770bp) protein (590aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9D2_9EURY
sw_10_scaffold_325_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7051..8487)
DNA (1437bp) protein (479aa)
aldH2; aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde Dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M739_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA41218.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
sw_10_scaffold_325_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8720..9838)
DNA (1119bp) protein (373aa)
Transcriptional regulator, TrmB n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQA9_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EFW93173.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
TrmB family transcriptional regulator
sw_10_scaffold_325_10
unknown

Not on your lists

10405..10791
DNA (387bp) protein (129aa)

This feature has no annotations

sw_10_scaffold_325_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10788..11804
DNA (1017bp) protein (339aa)
Arylsulfotransferase (ASST) n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NCQ9_9EURY
Arylsulfotransferase (ASST) {ECO:0000313|EMBL:ERG94720.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
hypothetical protein
sw_10_scaffold_325_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11952..12938
DNA (987bp) protein (329aa)
Xaa-Pro aminopeptidase M24 family protein (EC:3.4.-.-)
Peptidase M24 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQU4_9EURY
Peptidase M24 {ECO:0000313|EMBL:EFW93358.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
sw_10_scaffold_325_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13024..13989)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZU4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50818.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_325_14
Blastomyces dermatitidis, Blastomyces, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(14076..14462)
DNA (387bp) protein (129aa)
U3 small nucleolar RNA-associated protein 5 {ECO:0000313|EMBL:EGE79276.1}; TaxID=653446 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Aj
calcium-dependent protein kinase 3
sw_10_scaffold_325_15
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14702..15796
DNA (1095bp) protein (365aa)
celM; cellulase, endo-1,3(4)-beta-glucanase, peptidase M42 family protein / endoglucanase (EC:3.2.1.4)
Cellulase M related protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y2L3_9ARCH
Cellulase M related protein {ECO:0000313|EMBL:ERH07812.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
sw_10_scaffold_325_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16029..16964
DNA (936bp) protein (312aa)
Oxidoreductase domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M655_HALMO
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMA41302.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
oxidoreductase domain protein
sw_10_scaffold_325_17
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17180..17437
DNA (258bp) protein (86aa)
Sm ribonucleoprotein-like protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B4A9_9EURY
Sm ribonucleoprotein-like protein
Sm ribonucleoprotein-like protein {ECO:0000313|EMBL:ELY25306.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain
sw_10_scaffold_325_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17434..17604
DNA (171bp) protein (57aa)
50S ribosomal protein L37e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L4_NATM8
rpl37e; 50S ribosomal protein L37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_10_scaffold_325_19
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17731..19239
DNA (1509bp) protein (503aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR41_HALBP
sw_10_scaffold_325_20
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19451..20137)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AI78_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY97078.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_10_scaffold_325_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20242..21396
DNA (1155bp) protein (385aa)
Class I and II aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E1_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA53473.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
class I and II aminotransferase
sw_10_scaffold_325_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21586..21963
DNA (378bp) protein (126aa)
Translation initiation factor 5A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LU04_9EURY
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
translation initiation factor IF-5A
sw_10_scaffold_325_23
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22060..22893
DNA (834bp) protein (278aa)
Agmatinase {ECO:0000313|EMBL:AKH98312.1}; EC=3.5.3.11 {ECO:0000313|EMBL:AKH98312.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0M5_9EURY
sw_10_scaffold_325_24
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23241..24008
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=797303 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFY5_NATP1
dinuclear metal center protein, YbgI/SA1388 family
sw_10_scaffold_325_25
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24561..24725
DNA (165bp) protein (55aa)
Sensory rhodopsin-2 n=2 Tax=Halobacterium salinarum RepID=BACS2_HALSA
sopII; sensory rhodopsin II
Sensory rhodopsin II {ECO:0000313|EMBL:CAP14279.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (str
Displaying 25 items

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