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sw_10_scaffold_341

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_341_1
unknown

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_10_scaffold_341_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(314..1108)
DNA (795bp) protein (265aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MC99_HALMO
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
sw_10_scaffold_341_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1135..2010)
DNA (876bp) protein (292aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=1210908 species="
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Halogranum salarium B-1 RepID=J3JH53_9EURY
sw_10_scaffold_341_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2007..3503)
DNA (1497bp) protein (499aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M309_9EURY
sw_10_scaffold_341_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3500..4270)
DNA (771bp) protein (257aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=1324957 species="Archaea; E
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HK87_9EURY
sw_10_scaffold_341_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4396..4863
DNA (468bp) protein (156aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KHB6_HALAR
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:EMA19225.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
methylated-DNA--protein-cysteine methyltransferase
sw_10_scaffold_341_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5352..6272)
DNA (921bp) protein (307aa)
Metal-dependent membrane protease n=1 Tax=Halogranum salarium B-1 RepID=J3JH48_9EURY
abortive infection protein
Metal-dependent membrane protease {ECO:0000313|EMBL:EJN60679.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_10_scaffold_341_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6356..8173)
DNA (1818bp) protein (606aa)
ATP-dependent protease Lon (EC:3.4.21.53)
ATP-dependent protease Lon n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBU2_9EURY
ATP-dependent protease Lon {ECO:0000313|EMBL:EMA54140.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
sw_10_scaffold_341_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8684..9337
DNA (654bp) protein (218aa)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HK77_9EURY
sw_10_scaffold_341_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9393..10175
DNA (783bp) protein (261aa)
NAD operon protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFT8_9EURY
NAD operon protein {ECO:0000313|EMBL:EMA43295.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5
hypothetical protein
sw_10_scaffold_341_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10374..11231
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38027.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_10_scaffold_341_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11366..12925)
DNA (1560bp) protein (520aa)
Thermosome subunit 3 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N4P7_HALMO
Thermosome subunit 3 {ECO:0000313|EMBL:EMA51665.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
ths3; thermosome subunit 3
sw_10_scaffold_341_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13125..14108
DNA (984bp) protein (328aa)
Cytochrome oxidase subunit I-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQB5_9EURY
Cytochrome oxidase subunit I-like protein {ECO:0000313|EMBL:EMA47922.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
Exosortase EpsH-like protein
sw_10_scaffold_341_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14170..14973)
DNA (804bp) protein (268aa)
Diphthine synthase {ECO:0000256|HAMAP-Rule:MF_01084}; EC=2.1.1.98 {ECO:0000256|HAMAP-Rule:MF_01084};; Diphthamide biosynthesis methyltransferase {ECO:0000256|HAMAP-Rule:MF_01084}; TaxID=1227455 specie
diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRD2_9EURY
sw_10_scaffold_341_15
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15080..15577)
DNA (498bp) protein (166aa)
Glyoxalase family protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XGW2_9EURY
Glyoxalase family protein {ECO:0000313|EMBL:ELY60964.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus D
glyoxalase family protein
sw_10_scaffold_341_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15780..16769
DNA (990bp) protein (330aa)
Methyltransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M374_9EURY
Methyltransferase {ECO:0000313|EMBL:EMA38840.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
sw_10_scaffold_341_trna_1
unknown

Not on your lists

16956..17029
DNA (74bp)
transferRNA
sw_10_scaffold_341_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17125..18213)
DNA (1089bp) protein (363aa)
Serine/threonine phosphatase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGK7_9EURY
Serine/threonine phosphatase {ECO:0000313|EMBL:ELZ33933.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum palli
serine/threonine phosphatase
sw_10_scaffold_341_18
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18488..19105
DNA (618bp) protein (206aa)
S-adenosylmethionine-dependent methyltransferase 3 n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WLZ8_9EURY
S-adenosylmethionine-dependent methyltransferase 3 {ECO:0000313|EMBL:ELY50256.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Nat
methylase
sw_10_scaffold_341_19
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19215..19673)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W9J3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY46124.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
nitrile hydratase accessory protein
sw_10_scaffold_341_20
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19675..20295)
DNA (621bp) protein (207aa)
nitrile hydratase subunit alpha (EC:4.2.1.84)
Nitrile hydratase subunit alpha n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W9G4_9EURY
Nitrile hydratase subunit alpha {ECO:0000313|EMBL:ELY46125.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetens
sw_10_scaffold_341_21
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20427..21251)
DNA (825bp) protein (275aa)
nitrile hydratase (EC:4.2.1.84)
Nitrile hydratase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WA39_9EURY
Nitrile hydratase {ECO:0000313|EMBL:ELY46126.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
sw_10_scaffold_341_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21391..21927
DNA (537bp) protein (179aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY67_9EURY
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:EMA50672.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
ATP/cobalamin adenosyltransferase
sw_10_scaffold_341_trna_2
unknown

Not on your lists

21955..22029
DNA (75bp)
transferRNA
sw_10_scaffold_341_23
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22366..23487)
DNA (1122bp) protein (374aa)
Transposase IS4 family protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX33_HALLT
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ACM59024.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
Displaying 25 items

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